Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm44779-201ENSMUST00000206937 708 ntBASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm18602-201ENSMUST00000209794 851 ntBASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm8231-201ENSMUST00000221617 783 ntBASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC10.66□□□□□ -0.7
Trim41Q5NCC3 AC168056.2-201ENSMUST00000223591 269 ntBASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm24041-201ENSMUST00000083115 156 ntBASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Gm28320-201ENSMUST00000187777 2273 ntBASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trim41Q5NCC3 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim41Q5NCC3 AC159006.2-201ENSMUST00000228734 4144 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm12189-201ENSMUST00000119779 912 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm2768-201ENSMUST00000121062 250 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm27579-201ENSMUST00000158113 63 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm23350-201ENSMUST00000158429 103 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm17421-201ENSMUST00000167845 674 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm19898-201ENSMUST00000177490 251 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm27161-201ENSMUST00000183960 562 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm29147-201ENSMUST00000186846 315 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm9569-201ENSMUST00000187492 787 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm28160-201ENSMUST00000191229 315 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm17956-201ENSMUST00000199931 838 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm17990-201ENSMUST00000211728 553 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm22265-201ENSMUST00000082947 116 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm38156-201ENSMUST00000194601 2260 ntBASIC10.65□□□□□ -0.7
Trim41Q5NCC3 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trim41Q5NCC3 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trim41Q5NCC3 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trim41Q5NCC3 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC10.65□□□□□ -0.71
Trim41Q5NCC3 Gm9894-201ENSMUST00000171257 2904 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 AC156636.2-201ENSMUST00000218845 4557 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm38381-201ENSMUST00000193594 2275 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm44039-201ENSMUST00000204192 2246 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm42436-201ENSMUST00000198804 3656 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm13085-201ENSMUST00000118356 171 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm6067-201ENSMUST00000121648 491 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm20674-201ENSMUST00000177452 369 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm27004-201ENSMUST00000183300 727 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm18791-201ENSMUST00000204611 726 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm44259-201ENSMUST00000204996 298 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm45588-201ENSMUST00000211213 630 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm8106-201ENSMUST00000213123 523 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 CT025606.1-201ENSMUST00000218273 324 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 AC154510.1-201ENSMUST00000223925 737 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 n-R5s180-201ENSMUST00000082770 106 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm24319-201ENSMUST00000083389 107 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm10794-201ENSMUST00000099624 207 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm44046-201ENSMUST00000203145 2678 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm7195-201ENSMUST00000190869 1707 ntBASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trim41Q5NCC3 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trim41Q5NCC3 Gm25415-201ENSMUST00000104220 132 ntBASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms