Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Mir202-201ENSMUST00000083568 72 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm28322-201ENSMUST00000185627 1475 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Trim40Q3UWA4 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.3□□□□□ -1.72
Trim40Q3UWA4 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm12571-201ENSMUST00000118132 243 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm15019-201ENSMUST00000120148 434 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm12372-201ENSMUST00000121654 768 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm2389-201ENSMUST00000160487 189 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm7266-201ENSMUST00000187999 405 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm29525-201ENSMUST00000189844 699 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm29523-201ENSMUST00000191415 699 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm42454-201ENSMUST00000196805 1181 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm8929-201ENSMUST00000197781 1132 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm8891-201ENSMUST00000198546 832 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm42652-201ENSMUST00000199073 614 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm43418-201ENSMUST00000201334 428 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm44389-201ENSMUST00000203795 182 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm18924-201ENSMUST00000211929 316 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm18789-201ENSMUST00000216115 550 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm25799-201ENSMUST00000082643 107 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Gm23300-201ENSMUST00000082712 125 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Svet1-201ENSMUST00000209370 3940 ntBASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim40Q3UWA4 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Mir680-1-201ENSMUST00000102257 109 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm15073-201ENSMUST00000117432 634 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm11550-201ENSMUST00000118210 699 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Mir3080-201ENSMUST00000175010 79 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm9499-201ENSMUST00000180888 964 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Mir7012-201ENSMUST00000183900 64 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm20056-201ENSMUST00000194813 519 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm43090-201ENSMUST00000202459 314 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm45474-201ENSMUST00000209471 408 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm8106-201ENSMUST00000213123 523 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm18039-201ENSMUST00000217816 728 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm9269-201ENSMUST00000221661 578 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm9512-201ENSMUST00000223112 497 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 AC154692.1-201ENSMUST00000228314 544 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm22741-201ENSMUST00000083438 165 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.28□□□□□ -1.72
Trim40Q3UWA4 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms