Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm22046-201ENSMUST00000179027 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Snord116l10-201ENSMUST00000179053 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm23767-201ENSMUST00000179278 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm24153-201ENSMUST00000179280 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm25597-201ENSMUST00000179388 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Snord116l1-201ENSMUST00000179518 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Mup-ps6-201ENSMUST00000179564 545 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm22941-201ENSMUST00000179630 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm22631-201ENSMUST00000179656 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm25816-201ENSMUST00000179764 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Snord116l14-201ENSMUST00000179875 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Snord116l8-201ENSMUST00000179889 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Snord116l7-201ENSMUST00000179895 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Snord116l5-201ENSMUST00000179927 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Snord116l6-201ENSMUST00000179955 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm26188-201ENSMUST00000179963 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm25471-201ENSMUST00000180126 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm26433-201ENSMUST00000180227 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Snord116l11-201ENSMUST00000180312 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm23862-201ENSMUST00000180342 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm22128-201ENSMUST00000180346 94 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Mir3473f-201ENSMUST00000183743 136 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm18291-201ENSMUST00000190791 301 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm43370-201ENSMUST00000196437 284 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Igkv15-97-201ENSMUST00000197637 339 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm42999-201ENSMUST00000198049 786 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm23623-201ENSMUST00000082461 107 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm24043-201ENSMUST00000083108 116 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm21286-201ENSMUST00000098035 545 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a1Q04857 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a1Q04857 Naip3-201ENSMUST00000118082 4208 ntBASIC6.32□□□□□ -1.4
Col6a1Q04857 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col6a1Q04857 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a1Q04857 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col6a1Q04857 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm7269-201ENSMUST00000210819 1373 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.31□□□□□ -1.4
Col6a1Q04857 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a1Q04857 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a1Q04857 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a1Q04857 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a1Q04857 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm24265-201ENSMUST00000101833 141 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm26002-201ENSMUST00000101915 107 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm25564-201ENSMUST00000104604 132 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm15087-201ENSMUST00000117465 1172 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm11550-201ENSMUST00000118210 699 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm15660-201ENSMUST00000118997 478 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm7485-201ENSMUST00000119502 1109 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm14530-201ENSMUST00000122391 333 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a1Q04857 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.31□□□□□ -1.4
Col6a1Q04857 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a1Q04857 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm17121-201ENSMUST00000170414 847 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm3242-201ENSMUST00000171273 485 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm18604-201ENSMUST00000172535 558 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm22122-201ENSMUST00000175147 200 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm24407-201ENSMUST00000177864 141 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm17222-201ENSMUST00000180135 847 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm27342-201ENSMUST00000183530 109 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Mir7093-201ENSMUST00000184195 101 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm27636-201ENSMUST00000184528 122 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm18802-201ENSMUST00000186270 888 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm37095-201ENSMUST00000195421 205 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col6a1Q04857 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC6.31□□□□□ -1.4
Col6a1Q04857 AC153662.1-201ENSMUST00000222220 270 ntBASIC6.31□□□□□ -1.4
Col6a1Q04857 Gm7042-201ENSMUST00000223027 384 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms