Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5□□□□□ -1.61
Col8a1Q00780 Gm43031-201ENSMUST00000198500 1887 ntBASIC5□□□□□ -1.61
Col8a1Q00780 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Col8a1Q00780 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC5□□□□□ -1.61
Col8a1Q00780 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col8a1Q00780 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col8a1Q00780 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col8a1Q00780 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col8a1Q00780 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col8a1Q00780 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm42892-201ENSMUST00000196227 3973 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm22488-201ENSMUST00000116811 127 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm12016-201ENSMUST00000119079 681 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm7485-201ENSMUST00000119502 1109 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm6058-201ENSMUST00000154261 399 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm25970-201ENSMUST00000157165 86 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm17054-201ENSMUST00000169811 259 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Col8a1Q00780 Mup-ps7-201ENSMUST00000178292 545 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Mup-ps8-201ENSMUST00000178663 545 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Mup-ps9-201ENSMUST00000178847 545 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Mup-ps6-201ENSMUST00000179564 545 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm27796-201ENSMUST00000183863 261 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Mir6943-201ENSMUST00000185186 66 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm29551-201ENSMUST00000190913 698 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm37586-201ENSMUST00000193654 204 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm38291-201ENSMUST00000193671 259 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm37758-201ENSMUST00000194275 629 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm19147-201ENSMUST00000199622 652 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm43892-201ENSMUST00000204373 265 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm5027-201ENSMUST00000206700 375 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm17991-201ENSMUST00000208139 297 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col8a1Q00780 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm45366-201ENSMUST00000209828 384 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm46146-201ENSMUST00000217483 346 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm20368-201ENSMUST00000220716 301 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm5457-201ENSMUST00000022260 333 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 AC126554.2-201ENSMUST00000223259 400 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 AC154484.2-201ENSMUST00000228359 818 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col8a1Q00780 Olfr512-201ENSMUST00000074730 1056 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Mir31-201ENSMUST00000083474 106 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm21286-201ENSMUST00000098035 545 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Col8a1Q00780 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Col8a1Q00780 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm21122-201ENSMUST00000191548 3452 ntBASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
Col8a1Q00780 Gm42967-201ENSMUST00000198647 2312 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 Mir711-201ENSMUST00000102188 82 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm22273-201ENSMUST00000104040 132 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm9429-201ENSMUST00000117804 868 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm6587-201ENSMUST00000120219 613 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm23032-201ENSMUST00000157995 107 ntBASIC4.98□□□□□ -1.61
Col8a1Q00780 Gm22534-201ENSMUST00000158173 104 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms