Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Nkx3-1P97436 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Nkx3-1P97436 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm14908-201ENSMUST00000120930 1286 ntBASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm25386-201ENSMUST00000157814 288 ntBASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm22116-201ENSMUST00000158791 141 ntBASIC3.83□□□□□ -1.8
Nkx3-1P97436 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm38270-201ENSMUST00000192721 407 ntBASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm43005-201ENSMUST00000199015 648 ntBASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm4045-201ENSMUST00000204076 310 ntBASIC3.83□□□□□ -1.8
Nkx3-1P97436 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC3.83□□□□□ -1.8
Nkx3-1P97436 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm18016-201ENSMUST00000216119 801 ntBASIC3.83□□□□□ -1.8
Nkx3-1P97436 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.83□□□□□ -1.8
Nkx3-1P97436 AC122397.2-201ENSMUST00000227422 686 ntBASIC3.83□□□□□ -1.8
Nkx3-1P97436 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.83□□□□□ -1.8
Nkx3-1P97436 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Nkx3-1P97436 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm42910-201ENSMUST00000198917 2921 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Nkx3-1P97436 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm5391-201ENSMUST00000121155 613 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm14587-201ENSMUST00000121714 658 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm14122-201ENSMUST00000122076 973 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm2182-201ENSMUST00000145243 663 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm26347-201ENSMUST00000157526 131 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm22601-201ENSMUST00000157595 250 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm24224-201ENSMUST00000158828 258 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm16134-201ENSMUST00000161714 336 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm17046-201ENSMUST00000168078 850 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm6214-201ENSMUST00000178845 541 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm16378-201ENSMUST00000179168 342 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Mir6537-201ENSMUST00000184150 110 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm29031-201ENSMUST00000185316 614 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm29000-201ENSMUST00000185444 614 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm28204-201ENSMUST00000185934 614 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm28290-201ENSMUST00000186505 614 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm28161-201ENSMUST00000186669 614 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm28749-209ENSMUST00000189599 614 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm33163-201ENSMUST00000194504 614 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm43344-201ENSMUST00000198723 1229 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm43710-201ENSMUST00000199583 452 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm5876-201ENSMUST00000203735 243 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm44779-201ENSMUST00000206937 708 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm44879-201ENSMUST00000207007 503 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm18877-201ENSMUST00000207706 539 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm45523-201ENSMUST00000210712 799 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm45727-201ENSMUST00000212886 572 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm18510-201ENSMUST00000219335 1096 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Gm43188-201ENSMUST00000200180 2160 ntBASIC3.82□□□□□ -1.8
Nkx3-1P97436 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
Nkx3-1P97436 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm37831-201ENSMUST00000191685 1787 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms