Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm4540-201ENSMUST00000170669 429 ntBASIC5.16□□□□□ -1.58
Lig3P97386 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC5.16□□□□□ -1.58
Lig3P97386 Gm28859-201ENSMUST00000186650 616 ntBASIC5.16□□□□□ -1.58
Lig3P97386 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC5.16□□□□□ -1.58
Lig3P97386 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lig3P97386 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.16□□□□□ -1.58
Lig3P97386 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lig3P97386 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Lig3P97386 Gm7117-201ENSMUST00000071515 387 ntBASIC5.16□□□□□ -1.58
Lig3P97386 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Lig3P97386 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Lig3P97386 Snord22-201ENSMUST00000083153 126 ntBASIC5.16□□□□□ -1.58
Lig3P97386 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.16□□□□□ -1.58
Lig3P97386 Gm10780-201ENSMUST00000099459 285 ntBASIC5.16□□□□□ -1.58
Lig3P97386 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Lig3P97386 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lig3P97386 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.16□□□□□ -1.58
Lig3P97386 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lig3P97386 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Lig3P97386 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Lig3P97386 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lig3P97386 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Lig3P97386 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lig3P97386 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.16□□□□□ -1.58
Lig3P97386 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.16□□□□□ -1.58
Lig3P97386 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Lig3P97386 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.15□□□□□ -1.58
Lig3P97386 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
Lig3P97386 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.15□□□□□ -1.58
Lig3P97386 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Lig3P97386 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Lig3P97386 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Lig3P97386 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Lig3P97386 Gm22758-201ENSMUST00000102275 96 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Mir761-201ENSMUST00000103245 76 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Gm12039-201ENSMUST00000118219 180 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Anp32-ps-201ENSMUST00000118265 388 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Gm12820-201ENSMUST00000119233 342 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Gm15388-201ENSMUST00000121578 726 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Gm14713-201ENSMUST00000122362 686 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Gm22613-201ENSMUST00000122679 292 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.15□□□□□ -1.59
Lig3P97386 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lig3P97386 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.15□□□□□ -1.59
Lig3P97386 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lig3P97386 Gm24664-201ENSMUST00000158939 100 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lig3P97386 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lig3P97386 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Gm20673-201ENSMUST00000177167 430 ntBASIC5.15□□□□□ -1.59
Lig3P97386 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lig3P97386 Gm27036-201ENSMUST00000182465 980 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC5.15□□□□□ -1.59
Lig3P97386 Gm19086-201ENSMUST00000190772 665 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC5.15□□□□□ -1.59
Lig3P97386 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC5.15□□□□□ -1.59
Lig3P97386 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC5.15□□□□□ -1.59
Lig3P97386 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Lig3P97386 Gm5176-201ENSMUST00000218244 1227 ntBASIC5.15□□□□□ -1.59
Lig3P97386 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC5.15□□□□□ -1.59
Lig3P97386 AC116589.9-201ENSMUST00000221462 908 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Platr25-208ENSMUST00000222602 939 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Gm6988-201ENSMUST00000222676 375 ntBASIC5.15□□□□□ -1.59
Lig3P97386 AC158392.1-201ENSMUST00000223720 1069 ntBASIC5.15□□□□□ -1.59
Lig3P97386 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.15□□□□□ -1.59
Lig3P97386 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Lig3P97386 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Lig3P97386 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
Lig3P97386 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
Lig3P97386 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lig3P97386 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Lig3P97386 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Lig3P97386 Gm7171-201ENSMUST00000177413 1349 ntBASIC5.15□□□□□ -1.59
Lig3P97386 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lig3P97386 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lig3P97386 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Lig3P97386 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Lig3P97386 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.14□□□□□ -1.59
Lig3P97386 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Lig3P97386 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.14□□□□□ -1.59
Lig3P97386 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.14□□□□□ -1.59
Lig3P97386 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.14□□□□□ -1.59
Lig3P97386 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Lig3P97386 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Lig3P97386 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.14□□□□□ -1.59
Lig3P97386 Gm12222-201ENSMUST00000121368 260 ntBASIC5.14□□□□□ -1.59
Lig3P97386 Gm11349-201ENSMUST00000122209 1116 ntBASIC5.14□□□□□ -1.59
Lig3P97386 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.14□□□□□ -1.59
Lig3P97386 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Lig3P97386 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.14□□□□□ -1.59
Lig3P97386 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Lig3P97386 Gm24745-201ENSMUST00000157840 85 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms