Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SgcbP82349 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC5.51□□□□□ -1.53
SgcbP82349 Gm29111-201ENSMUST00000188823 696 ntBASIC5.51□□□□□ -1.53
SgcbP82349 Gm28584-201ENSMUST00000191489 696 ntBASIC5.51□□□□□ -1.53
SgcbP82349 Gm38138-201ENSMUST00000193274 696 ntBASIC5.51□□□□□ -1.53
SgcbP82349 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.51□□□□□ -1.53
SgcbP82349 Gm42828-201ENSMUST00000199669 469 ntBASIC5.51□□□□□ -1.53
SgcbP82349 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SgcbP82349 Gm45402-201ENSMUST00000211796 223 ntBASIC5.51□□□□□ -1.53
SgcbP82349 Gm18488-201ENSMUST00000215082 364 ntBASIC5.51□□□□□ -1.53
SgcbP82349 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.51□□□□□ -1.53
SgcbP82349 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.51□□□□□ -1.53
SgcbP82349 Gm10095-201ENSMUST00000222765 483 ntBASIC5.51□□□□□ -1.53
SgcbP82349 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.51□□□□□ -1.53
SgcbP82349 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SgcbP82349 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SgcbP82349 Gm4017-201ENSMUST00000084813 338 ntBASIC5.51□□□□□ -1.53
SgcbP82349 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
SgcbP82349 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.51□□□□□ -1.53
SgcbP82349 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SgcbP82349 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.51□□□□□ -1.53
SgcbP82349 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SgcbP82349 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SgcbP82349 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.51□□□□□ -1.53
SgcbP82349 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SgcbP82349 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SgcbP82349 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SgcbP82349 Gm37096-201ENSMUST00000192317 2058 ntBASIC5.51□□□□□ -1.53
SgcbP82349 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
SgcbP82349 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
SgcbP82349 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.5□□□□□ -1.53
SgcbP82349 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
SgcbP82349 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SgcbP82349 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SgcbP82349 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SgcbP82349 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.5□□□□□ -1.53
SgcbP82349 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC5.5□□□□□ -1.53
SgcbP82349 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SgcbP82349 Gm25415-201ENSMUST00000104220 132 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm22374-201ENSMUST00000104583 132 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm14772-201ENSMUST00000116562 514 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm14529-201ENSMUST00000117894 406 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Gm11409-201ENSMUST00000118621 403 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm14517-201ENSMUST00000119040 337 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
SgcbP82349 Gm16016-201ENSMUST00000120831 550 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm13745-201ENSMUST00000121994 527 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Gm25962-201ENSMUST00000157173 168 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm22307-201ENSMUST00000180019 107 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SgcbP82349 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.5□□□□□ -1.53
SgcbP82349 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SgcbP82349 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Gm8009-201ENSMUST00000191672 436 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm31211-201ENSMUST00000199170 253 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm43825-201ENSMUST00000199650 734 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm2602-201ENSMUST00000202112 571 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm43919-201ENSMUST00000204303 364 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm44580-201ENSMUST00000206333 877 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm19880-201ENSMUST00000207731 318 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm45232-201ENSMUST00000207811 162 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC5.5□□□□□ -1.53
SgcbP82349 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC5.5□□□□□ -1.53
SgcbP82349 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC5.5□□□□□ -1.53
SgcbP82349 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC5.5□□□□□ -1.53
SgcbP82349 AC122924.2-201ENSMUST00000220799 298 ntBASIC5.5□□□□□ -1.53
SgcbP82349 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm9293-201ENSMUST00000223096 306 ntBASIC5.5□□□□□ -1.53
SgcbP82349 AC154224.1-201ENSMUST00000224367 403 ntBASIC5.5□□□□□ -1.53
SgcbP82349 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Clec2j-201ENSMUST00000032517 515 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm5582-201ENSMUST00000075251 522 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm25141-201ENSMUST00000083177 107 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.5□□□□□ -1.53
SgcbP82349 Gm3616-201ENSMUST00000174430 2514 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Gm3683-201ENSMUST00000175701 2513 ntBASIC5.5□□□□□ -1.53
SgcbP82349 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SgcbP82349 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 116.9 ms