Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC5.88□□□□□ -1.47
Hmgb1P63158 Gm43344-201ENSMUST00000198723 1229 ntBASIC5.88□□□□□ -1.47
Hmgb1P63158 Gm44673-201ENSMUST00000205692 996 ntBASIC5.88□□□□□ -1.47
Hmgb1P63158 Gm45750-201ENSMUST00000211966 354 ntBASIC5.88□□□□□ -1.47
Hmgb1P63158 Gm35262-201ENSMUST00000215133 267 ntBASIC5.88□□□□□ -1.47
Hmgb1P63158 AC159476.2-201ENSMUST00000216221 418 ntBASIC5.88□□□□□ -1.47
Hmgb1P63158 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.88□□□□□ -1.47
Hmgb1P63158 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC5.88□□□□□ -1.47
Hmgb1P63158 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.88□□□□□ -1.47
Hmgb1P63158 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Hmgb1P63158 Gm38235-201ENSMUST00000194600 4952 ntBASIC5.88□□□□□ -1.47
Hmgb1P63158 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb1P63158 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Hmgb1P63158 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb1P63158 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.88□□□□□ -1.47
Hmgb1P63158 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.88□□□□□ -1.47
Hmgb1P63158 Gm5583-201ENSMUST00000174328 1519 ntBASIC5.88□□□□□ -1.47
Hmgb1P63158 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Hmgb1P63158 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Hmgb1P63158 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.88□□□□□ -1.47
Hmgb1P63158 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC5.88□□□□□ -1.47
Hmgb1P63158 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb1P63158 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Hmgb1P63158 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm11914-201ENSMUST00000117094 507 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm15828-201ENSMUST00000119911 522 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm12482-201ENSMUST00000120435 630 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm13502-201ENSMUST00000121574 684 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm22326-201ENSMUST00000158897 351 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm25445-201ENSMUST00000158996 299 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm17061-201ENSMUST00000163167 499 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm3216-201ENSMUST00000166927 486 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Mir6411-201ENSMUST00000183556 108 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb1P63158 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm28190-201ENSMUST00000189766 722 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm20811-201ENSMUST00000190500 553 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm35570-201ENSMUST00000198730 681 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm44307-201ENSMUST00000204466 764 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm44074-201ENSMUST00000204562 337 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm17988-201ENSMUST00000208796 535 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm8249-201ENSMUST00000219225 465 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm8274-201ENSMUST00000219820 463 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb1P63158 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb1P63158 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb1P63158 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.87□□□□□ -1.47
Hmgb1P63158 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb1P63158 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb1P63158 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Hmgb1P63158 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Hmgb1P63158 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb1P63158 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Hmgb1P63158 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.86□□□□□ -1.47
Hmgb1P63158 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Hmgb1P63158 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Hmgb1P63158 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.86□□□□□ -1.47
Hmgb1P63158 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
Hmgb1P63158 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.86□□□□□ -1.47
Hmgb1P63158 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Hmgb1P63158 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Hmgb1P63158 Gm16017-201ENSMUST00000119834 208 ntBASIC5.86□□□□□ -1.47
Hmgb1P63158 Gm16458-201ENSMUST00000121428 502 ntBASIC5.86□□□□□ -1.47
Hmgb1P63158 Gm23354-201ENSMUST00000158426 104 ntBASIC5.86□□□□□ -1.47
Hmgb1P63158 Gm23115-201ENSMUST00000158480 108 ntBASIC5.86□□□□□ -1.47
Hmgb1P63158 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC5.86□□□□□ -1.47
Hmgb1P63158 Gm27887-201ENSMUST00000184367 102 ntBASIC5.86□□□□□ -1.47
Hmgb1P63158 Gm29376-201ENSMUST00000189357 835 ntBASIC5.86□□□□□ -1.47
Hmgb1P63158 Gm28996-201ENSMUST00000190316 721 ntBASIC5.86□□□□□ -1.47
Hmgb1P63158 Gm38281-201ENSMUST00000192301 315 ntBASIC5.86□□□□□ -1.47
Hmgb1P63158 Gm37445-201ENSMUST00000195318 242 ntBASIC5.86□□□□□ -1.47
Hmgb1P63158 Gm43456-201ENSMUST00000202519 457 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 100.3 ms