Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC6.07□□□□□ -1.44
Sox1P53783 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Rnu3a-202ENSMUST00000196710 213 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Gm43315-201ENSMUST00000198120 313 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sox1P53783 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.07□□□□□ -1.44
Sox1P53783 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC6.07□□□□□ -1.44
Sox1P53783 Gm2607-201ENSMUST00000212389 627 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Gm20304-201ENSMUST00000218168 444 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Gm46193-201ENSMUST00000219399 364 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Gm7753-201ENSMUST00000221007 867 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 Rnu3a-201ENSMUST00000083936 214 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox1P53783 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox1P53783 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.07□□□□□ -1.44
Sox1P53783 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Sox1P53783 AC122887.2-201ENSMUST00000219465 1603 ntBASIC6.07□□□□□ -1.44
Sox1P53783 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.06□□□□□ -1.44
Sox1P53783 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox1P53783 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox1P53783 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sox1P53783 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sox1P53783 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Sox1P53783 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox1P53783 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox1P53783 Gm37250-201ENSMUST00000194919 2388 ntBASIC6.06□□□□□ -1.44
Sox1P53783 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.06□□□□□ -1.44
Sox1P53783 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox1P53783 Gm11908-201ENSMUST00000117755 347 ntBASIC6.06□□□□□ -1.44
Sox1P53783 Gm13604-201ENSMUST00000119332 482 ntBASIC6.06□□□□□ -1.44
Sox1P53783 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.06□□□□□ -1.44
Sox1P53783 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox1P53783 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Sox1P53783 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC6.06□□□□□ -1.44
Sox1P53783 Gm22646-201ENSMUST00000175130 115 ntBASIC6.06□□□□□ -1.44
Sox1P53783 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC6.06□□□□□ -1.44
Sox1P53783 Igkv2-107-201ENSMUST00000196000 313 ntBASIC6.06□□□□□ -1.44
Sox1P53783 Gm43160-201ENSMUST00000196453 421 ntBASIC6.06□□□□□ -1.44
Sox1P53783 Gm43524-201ENSMUST00000197278 298 ntBASIC6.06□□□□□ -1.44
Sox1P53783 Gm32158-201ENSMUST00000200135 404 ntBASIC6.06□□□□□ -1.44
Sox1P53783 Gm44266-201ENSMUST00000205235 500 ntBASIC6.06□□□□□ -1.44
Sox1P53783 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC6.06□□□□□ -1.44
Sox1P53783 Gm7128-201ENSMUST00000211639 533 ntBASIC6.06□□□□□ -1.44
Sox1P53783 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.06□□□□□ -1.44
Sox1P53783 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC6.06□□□□□ -1.44
Sox1P53783 Gm5023-201ENSMUST00000217442 587 ntBASIC6.06□□□□□ -1.44
Sox1P53783 AC138718.1-201ENSMUST00000225947 1009 ntBASIC6.06□□□□□ -1.44
Sox1P53783 AC113031.5-201ENSMUST00000227116 606 ntBASIC6.06□□□□□ -1.44
Sox1P53783 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.06□□□□□ -1.44
Sox1P53783 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox1P53783 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sox1P53783 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Sox1P53783 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Sox1P53783 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Sox1P53783 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC6.06□□□□□ -1.44
Sox1P53783 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.06□□□□□ -1.44
Sox1P53783 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Sox1P53783 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox1P53783 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox1P53783 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox1P53783 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.06□□□□□ -1.44
Sox1P53783 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.06□□□□□ -1.44
Sox1P53783 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox1P53783 Gm37903-201ENSMUST00000192122 2381 ntBASIC6.06□□□□□ -1.44
Sox1P53783 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Sox1P53783 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox1P53783 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox1P53783 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox1P53783 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox1P53783 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Sox1P53783 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox1P53783 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Sox1P53783 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox1P53783 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox1P53783 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox1P53783 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox1P53783 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Sox1P53783 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox1P53783 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox1P53783 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox1P53783 Gm6818-201ENSMUST00000190556 2558 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Sox1P53783 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Gm13672-201ENSMUST00000117554 459 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Gm6893-201ENSMUST00000118385 522 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Gm11321-201ENSMUST00000121257 902 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Gm25826-201ENSMUST00000157090 137 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox1P53783 Gm9071-201ENSMUST00000165915 474 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Gm24897-201ENSMUST00000179033 107 ntBASIC6.05□□□□□ -1.44
Sox1P53783 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms