Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm6650-201ENSMUST00000166710 614 ntBASIC6.58□□□□□ -1.36
Col18a1P39061 Gm26219-201ENSMUST00000175216 71 ntBASIC6.58□□□□□ -1.36
Col18a1P39061 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col18a1P39061 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC6.58□□□□□ -1.36
Col18a1P39061 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC6.58□□□□□ -1.36
Col18a1P39061 Gm37219-201ENSMUST00000192036 926 ntBASIC6.58□□□□□ -1.36
Col18a1P39061 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC6.58□□□□□ -1.36
Col18a1P39061 Gm18258-201ENSMUST00000210413 542 ntBASIC6.58□□□□□ -1.36
Col18a1P39061 Gm7807-201ENSMUST00000212475 578 ntBASIC6.58□□□□□ -1.36
Col18a1P39061 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col18a1P39061 n-R5s168-201ENSMUST00000083948 104 ntBASIC6.58□□□□□ -1.36
Col18a1P39061 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Col18a1P39061 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col18a1P39061 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Col18a1P39061 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col18a1P39061 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.58□□□□□ -1.36
Col18a1P39061 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col18a1P39061 Gm43793-201ENSMUST00000201645 1333 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col18a1P39061 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC6.57□□□□□ -1.36
Col18a1P39061 Gm14107-201ENSMUST00000117774 330 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Gm11931-201ENSMUST00000121630 447 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC6.57□□□□□ -1.36
Col18a1P39061 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Col18a1P39061 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col18a1P39061 Gm37636-201ENSMUST00000193583 359 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Trbv11-201ENSMUST00000194354 260 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Trav5d-2-201ENSMUST00000196107 275 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Trav5n-2-201ENSMUST00000197136 275 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC6.57□□□□□ -1.36
Col18a1P39061 Gm8911-201ENSMUST00000213986 652 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC6.57□□□□□ -1.36
Col18a1P39061 AC158536.1-201ENSMUST00000222510 256 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Gm26165-201ENSMUST00000083791 138 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col18a1P39061 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col18a1P39061 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col18a1P39061 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col18a1P39061 Gm44224-201ENSMUST00000204131 1463 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col18a1P39061 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC6.57□□□□□ -1.36
Col18a1P39061 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col18a1P39061 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Col18a1P39061 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Col18a1P39061 AC144772.1-201ENSMUST00000226372 2398 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Gm37779-201ENSMUST00000194221 3380 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col18a1P39061 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col18a1P39061 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Col18a1P39061 Gm14067-201ENSMUST00000119340 314 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Gm12639-201ENSMUST00000121400 493 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC6.57□□□□□ -1.36
Col18a1P39061 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC6.57□□□□□ -1.36
Col18a1P39061 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Col18a1P39061 Mir3473c-201ENSMUST00000175262 81 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Gm27818-201ENSMUST00000184536 159 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC6.57□□□□□ -1.36
Col18a1P39061 Gm37243-201ENSMUST00000193407 595 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Gm42830-201ENSMUST00000196642 313 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Gm42594-201ENSMUST00000199511 246 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Gm17956-201ENSMUST00000199931 838 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Gm20997-201ENSMUST00000205148 231 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC6.57□□□□□ -1.36
Col18a1P39061 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col18a1P39061 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Gm18585-201ENSMUST00000215197 556 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 AC154592.1-201ENSMUST00000225784 574 ntBASIC6.57□□□□□ -1.36
Col18a1P39061 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Col18a1P39061 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col18a1P39061 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Col18a1P39061 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Col18a1P39061 Gm38125-201ENSMUST00000194136 3438 ntBASIC6.56□□□□□ -1.36
Col18a1P39061 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC6.56□□□□□ -1.36
Col18a1P39061 Gm43281-201ENSMUST00000202522 2704 ntBASIC6.56□□□□□ -1.36
Col18a1P39061 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col18a1P39061 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col18a1P39061 Gm14442-201ENSMUST00000119690 1736 ntBASIC6.56□□□□□ -1.36
Col18a1P39061 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC6.56□□□□□ -1.36
Col18a1P39061 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col18a1P39061 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col18a1P39061 Gm43990-201ENSMUST00000203790 1691 ntBASIC6.56□□□□□ -1.36
Col18a1P39061 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Col18a1P39061 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col18a1P39061 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col18a1P39061 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col18a1P39061 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.56□□□□□ -1.36
Col18a1P39061 Gm24430-201ENSMUST00000104077 104 ntBASIC6.56□□□□□ -1.36
Col18a1P39061 Gm24982-201ENSMUST00000104456 132 ntBASIC6.56□□□□□ -1.36
Col18a1P39061 Gm13711-201ENSMUST00000119708 453 ntBASIC6.56□□□□□ -1.36
Col18a1P39061 Gm14989-201ENSMUST00000120497 207 ntBASIC6.56□□□□□ -1.36
Col18a1P39061 Gm27796-201ENSMUST00000183863 261 ntBASIC6.56□□□□□ -1.36
Col18a1P39061 Gm27236-201ENSMUST00000184147 442 ntBASIC6.56□□□□□ -1.36
Col18a1P39061 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col18a1P39061 Gm37715-201ENSMUST00000193206 235 ntBASIC6.56□□□□□ -1.36
Col18a1P39061 Gm38109-201ENSMUST00000195386 181 ntBASIC6.56□□□□□ -1.36
Col18a1P39061 Gm35212-201ENSMUST00000196672 606 ntBASIC6.56□□□□□ -1.36
Col18a1P39061 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col18a1P39061 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC6.56□□□□□ -1.36
Col18a1P39061 Gm5917-201ENSMUST00000217638 721 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 153.1 ms