Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm22725-201ENSMUST00000158092 110 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Cdx1P18111 Gm8256-201ENSMUST00000169178 453 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Samd15-201ENSMUST00000169669 1194 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Cdx1P18111 Gm25534-201ENSMUST00000175365 125 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Cdx1P18111 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Cdx1P18111 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC3.86□□□□□ -1.79
Cdx1P18111 Gm27688-201ENSMUST00000183634 91 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.86□□□□□ -1.79
Cdx1P18111 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.86□□□□□ -1.79
Cdx1P18111 Trbv11-201ENSMUST00000194354 260 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm29815-201ENSMUST00000202418 178 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm44281-201ENSMUST00000203090 166 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm19366-201ENSMUST00000206996 156 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm18306-201ENSMUST00000207338 569 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm18127-201ENSMUST00000208479 725 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm17766-201ENSMUST00000209223 442 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC3.86□□□□□ -1.79
Cdx1P18111 Gm6303-201ENSMUST00000210123 471 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm45731-201ENSMUST00000211988 1203 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 AC154296.3-201ENSMUST00000214427 712 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 AC160031.1-201ENSMUST00000219914 522 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 AC125190.2-201ENSMUST00000221160 497 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 AC114573.1-201ENSMUST00000224120 1210 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 AC152169.2-201ENSMUST00000224558 613 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Cdx1P18111 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
Cdx1P18111 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Cdx1P18111 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Cdx1P18111 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Cdx1P18111 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC3.86□□□□□ -1.79
Cdx1P18111 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Cdx1P18111 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Cdx1P18111 Gm26449-201ENSMUST00000082452 104 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm24706-201ENSMUST00000082806 137 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Snord14e-201ENSMUST00000082857 90 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm22741-201ENSMUST00000083438 165 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Olfr878-201ENSMUST00000086061 1065 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
Cdx1P18111 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Cdx1P18111 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.86□□□□□ -1.79
Cdx1P18111 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Cdx1P18111 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Cdx1P18111 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Cdx1P18111 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cdx1P18111 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cdx1P18111 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Cdx1P18111 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cdx1P18111 Gm23692-201ENSMUST00000101881 160 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC3.85□□□□□ -1.79
Cdx1P18111 Gm7206-201ENSMUST00000117730 508 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Gm5123-201ENSMUST00000121905 837 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Gm15171-201ENSMUST00000122191 334 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Gm11349-201ENSMUST00000122209 1116 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 n-R5s98-201ENSMUST00000122549 119 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Gm5755-201ENSMUST00000152394 837 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Gm6542-201ENSMUST00000153606 772 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cdx1P18111 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cdx1P18111 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Cdx1P18111 Gm27818-201ENSMUST00000184536 159 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Cdx1P18111 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC3.85□□□□□ -1.79
Cdx1P18111 Ighv1-3-201ENSMUST00000192764 302 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 AC136146.1-201ENSMUST00000196180 91 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Gm43494-201ENSMUST00000197672 388 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Cdx1P18111 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC3.85□□□□□ -1.79
Cdx1P18111 AC122465.3-201ENSMUST00000221644 355 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 CT030166.1-201ENSMUST00000222654 357 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 AC154634.3-201ENSMUST00000224589 736 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 AC154371.1-201ENSMUST00000226600 412 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 AC133517.2-201ENSMUST00000226820 690 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 n-R5s62-201ENSMUST00000082780 96 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 n-R5s160-201ENSMUST00000083096 120 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Gm25139-201ENSMUST00000083247 210 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Mir17-201ENSMUST00000083574 84 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Cdx1P18111 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Cdx1P18111 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Cdx1P18111 Gm43130-201ENSMUST00000197721 3907 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Gm43121-201ENSMUST00000199065 1305 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Gm7529-201ENSMUST00000213753 1897 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cdx1P18111 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Cdx1P18111 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Cdx1P18111 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Cdx1P18111 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.85□□□□□ -1.79
Cdx1P18111 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Cdx1P18111 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms