Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm7496-201ENSMUST00000192573 1034 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Trbv11-201ENSMUST00000194354 260 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm33973-201ENSMUST00000195148 534 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm17766-201ENSMUST00000209223 442 ntBASIC4.81□□□□□ -1.64
Lire1P11260 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Lire1P11260 Gm18541-201ENSMUST00000215935 538 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Lire1P11260 AL772397.1-201ENSMUST00000216707 606 ntBASIC4.81□□□□□ -1.64
Lire1P11260 AC123067.1-201ENSMUST00000217711 462 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.81□□□□□ -1.64
Lire1P11260 AC153548.2-201ENSMUST00000219770 885 ntBASIC4.81□□□□□ -1.64
Lire1P11260 AC162467.1-201ENSMUST00000220254 621 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Lire1P11260 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm5185-201ENSMUST00000080271 619 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Mir449a-201ENSMUST00000083641 91 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Lire1P11260 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Lire1P11260 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Lire1P11260 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Lire1P11260 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.81□□□□□ -1.64
Lire1P11260 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.81□□□□□ -1.64
Lire1P11260 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Lire1P11260 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Lire1P11260 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Lire1P11260 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lire1P11260 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lire1P11260 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Lire1P11260 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lire1P11260 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Lire1P11260 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Lire1P11260 Gm13487-201ENSMUST00000122240 864 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm22958-201ENSMUST00000122512 184 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC4.8□□□□□ -1.64
Lire1P11260 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Lire1P11260 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm25456-201ENSMUST00000157952 109 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm7609-204ENSMUST00000161424 461 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm27754-201ENSMUST00000183340 126 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm29031-201ENSMUST00000185316 614 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm29000-201ENSMUST00000185444 614 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm28204-201ENSMUST00000185934 614 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm28290-201ENSMUST00000186505 614 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm28161-201ENSMUST00000186669 614 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm28749-209ENSMUST00000189599 614 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm37631-201ENSMUST00000192275 364 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm37111-201ENSMUST00000193250 634 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm33163-201ENSMUST00000194504 614 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm43304-201ENSMUST00000196803 326 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm43345-201ENSMUST00000199484 269 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.8□□□□□ -1.64
Lire1P11260 Gm43894-201ENSMUST00000203274 688 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm44237-201ENSMUST00000205183 936 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC4.8□□□□□ -1.64
Lire1P11260 Gm7726-201ENSMUST00000206241 231 ntBASIC4.8□□□□□ -1.64
Lire1P11260 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.8□□□□□ -1.64
Lire1P11260 AC159472.1-201ENSMUST00000218178 463 ntBASIC4.8□□□□□ -1.64
Lire1P11260 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.8□□□□□ -1.64
Lire1P11260 AC151730.2-201ENSMUST00000224027 475 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lire1P11260 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Lire1P11260 Gm4963-201ENSMUST00000072718 378 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Lire1P11260 Mir30b-201ENSMUST00000083542 96 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC4.8□□□□□ -1.64
Lire1P11260 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Lire1P11260 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lire1P11260 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Lire1P11260 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
Lire1P11260 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Lire1P11260 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Lire1P11260 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Lire1P11260 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Lire1P11260 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lire1P11260 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lire1P11260 Gm23063-201ENSMUST00000102350 93 ntBASIC4.79□□□□□ -1.64
Lire1P11260 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lire1P11260 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms