Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm18387-201ENSMUST00000220333 702 ntBASIC4.67□□□□□ -1.66
Srp54bE9PXC0 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.67□□□□□ -1.66
Srp54bE9PXC0 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.67□□□□□ -1.66
Srp54bE9PXC0 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.67□□□□□ -1.66
Srp54bE9PXC0 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.67□□□□□ -1.66
Srp54bE9PXC0 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Srp54bE9PXC0 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Srp54bE9PXC0 Gm23300-201ENSMUST00000082712 125 ntBASIC4.67□□□□□ -1.66
Srp54bE9PXC0 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.67□□□□□ -1.66
Srp54bE9PXC0 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Srp54bE9PXC0 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Srp54bE9PXC0 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Srp54bE9PXC0 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Srp54bE9PXC0 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
Srp54bE9PXC0 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.67□□□□□ -1.66
Srp54bE9PXC0 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Srp54bE9PXC0 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Srp54bE9PXC0 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Srp54bE9PXC0 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Srp54bE9PXC0 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm16082-201ENSMUST00000115992 377 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm14352-201ENSMUST00000119250 449 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm13508-201ENSMUST00000121639 775 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm23179-201ENSMUST00000158693 304 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Mir6926-201ENSMUST00000184562 68 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm29525-201ENSMUST00000189844 699 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm29523-201ENSMUST00000191415 699 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm37836-201ENSMUST00000195875 175 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm17937-201ENSMUST00000197908 742 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm44261-201ENSMUST00000203337 209 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm19786-201ENSMUST00000222589 580 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm25140-201ENSMUST00000083254 140 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.66□□□□□ -1.66
Srp54bE9PXC0 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Srp54bE9PXC0 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.65□□□□□ -1.66
Srp54bE9PXC0 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.65□□□□□ -1.66
Srp54bE9PXC0 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Srp54bE9PXC0 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.65□□□□□ -1.66
Srp54bE9PXC0 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Srp54bE9PXC0 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Srp54bE9PXC0 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm9432-201ENSMUST00000117810 759 ntBASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm11631-201ENSMUST00000119220 156 ntBASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm12849-201ENSMUST00000120013 739 ntBASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm15141-201ENSMUST00000121860 729 ntBASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm5392-201ENSMUST00000122189 789 ntBASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm22084-201ENSMUST00000157585 105 ntBASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm24751-201ENSMUST00000157844 102 ntBASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm19200-201ENSMUST00000182579 1001 ntBASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm29281-201ENSMUST00000188077 381 ntBASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm38221-201ENSMUST00000195146 365 ntBASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Gm32536-201ENSMUST00000205209 445 ntBASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.65□□□□□ -1.67
Srp54bE9PXC0 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Srp54bE9PXC0 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.65□□□□□ -1.67
Srp54bE9PXC0 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC4.65□□□□□ -1.67
Srp54bE9PXC0 AC154198.1-201ENSMUST00000222839 424 ntBASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Srp54bE9PXC0 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms