Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm45379-201ENSMUST00000211772 549 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm23296-201ENSMUST00000082555 107 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm24859-201ENSMUST00000082729 107 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm12173-201ENSMUST00000117622 273 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 AC144783.2-201ENSMUST00000219089 195 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm38067-201ENSMUST00000192346 1911 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Col6a3E9PWQ3 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Col6a3E9PWQ3 Gm6382-201ENSMUST00000118873 942 ntBASIC4.15□□□□□ -1.74
Col6a3E9PWQ3 Gm22480-201ENSMUST00000122568 128 ntBASIC4.15□□□□□ -1.74
Col6a3E9PWQ3 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC4.15□□□□□ -1.74
Col6a3E9PWQ3 Gm38360-201ENSMUST00000195130 454 ntBASIC4.15□□□□□ -1.74
Col6a3E9PWQ3 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC4.15□□□□□ -1.74
Col6a3E9PWQ3 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
Col6a3E9PWQ3 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.15□□□□□ -1.74
Col6a3E9PWQ3 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.15□□□□□ -1.74
Col6a3E9PWQ3 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Col6a3E9PWQ3 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Col6a3E9PWQ3 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Col6a3E9PWQ3 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Col6a3E9PWQ3 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.15□□□□□ -1.74
Col6a3E9PWQ3 Gm12902-201ENSMUST00000118389 322 ntBASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 Gm43521-201ENSMUST00000197838 255 ntBASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 Gm43107-201ENSMUST00000198729 255 ntBASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 AC154441.1-201ENSMUST00000223653 1006 ntBASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 n-R5s31-201ENSMUST00000104162 110 ntBASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 Gm24371-201ENSMUST00000122662 267 ntBASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 Gm18900-201ENSMUST00000193218 584 ntBASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Col6a3E9PWQ3 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Gm22314-201ENSMUST00000158007 281 ntBASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Gm17117-201ENSMUST00000163665 299 ntBASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Gm44820-201ENSMUST00000207420 396 ntBASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Gm21007-201ENSMUST00000221024 326 ntBASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 CT030195.1-201ENSMUST00000223887 378 ntBASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Gm45477-201ENSMUST00000200213 5498 ntBASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Zfp445-206ENSMUST00000216063 6189 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Gm18432-201ENSMUST00000195568 1451 ntBASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Gm2862-201ENSMUST00000161524 328 ntBASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Gm25707-201ENSMUST00000175120 96 ntBASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Gm38041-201ENSMUST00000194445 661 ntBASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Gm45343-201ENSMUST00000210452 828 ntBASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Ints2-201ENSMUST00000018212 5906 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Gm38128-201ENSMUST00000192085 3250 ntBASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.14□□□□□ -1.75
Col6a3E9PWQ3 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms