Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Col4a6B1AVK5 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Gm11325-201ENSMUST00000119967 469 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Gm13902-201ENSMUST00000120168 605 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Clec2f-201ENSMUST00000121051 374 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Gm12885-201ENSMUST00000122246 328 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Gm23964-201ENSMUST00000157966 107 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Gm22011-201ENSMUST00000158790 123 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Gm25447-201ENSMUST00000158997 128 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Gm28655-201ENSMUST00000191538 692 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Gm8023-201ENSMUST00000195298 903 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Gm43649-201ENSMUST00000196596 391 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Gm45845-201ENSMUST00000207326 582 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.46□□□□□ -1.7
Col4a6B1AVK5 AC122305.2-201ENSMUST00000215148 834 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Gm42727-201ENSMUST00000202446 2823 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col4a6B1AVK5 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.46□□□□□ -1.7
Col4a6B1AVK5 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Gm37060-201ENSMUST00000194997 2397 ntBASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Spin2g-201ENSMUST00000178425 687 ntBASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 CT030184.2-201ENSMUST00000223064 263 ntBASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Gm10145-201ENSMUST00000077776 462 ntBASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Mir879-201ENSMUST00000104703 76 ntBASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Gm12335-201ENSMUST00000119738 327 ntBASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Gm13852-201ENSMUST00000122350 242 ntBASIC4.45□□□□□ -1.7
Col4a6B1AVK5 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Gm22314-201ENSMUST00000158007 281 ntBASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Gm21638-201ENSMUST00000179473 836 ntBASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Gm43005-201ENSMUST00000199015 648 ntBASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.45□□□□□ -1.7
Col4a6B1AVK5 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Gm18066-201ENSMUST00000210904 1774 ntBASIC4.45□□□□□ -1.7
Col4a6B1AVK5 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Gm6558-201ENSMUST00000191934 1973 ntBASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
Col4a6B1AVK5 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Gm12173-201ENSMUST00000117622 273 ntBASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Gm12379-201ENSMUST00000119607 391 ntBASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Gm10059-201ENSMUST00000131139 171 ntBASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Gm23496-201ENSMUST00000157741 248 ntBASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Gm16290-201ENSMUST00000161175 474 ntBASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Gm16545-201ENSMUST00000161968 463 ntBASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Gm4540-201ENSMUST00000170669 429 ntBASIC4.44□□□□□ -1.7
Col4a6B1AVK5 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC4.44□□□□□ -1.7
Col4a6B1AVK5 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms