Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm5757-201ENSMUST00000117494 528 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm12173-201ENSMUST00000117622 273 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm14861-201ENSMUST00000119451 455 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm14065-201ENSMUST00000120848 585 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm23121-201ENSMUST00000157653 173 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm22968-201ENSMUST00000157955 118 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm22135-201ENSMUST00000158752 108 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm22120-201ENSMUST00000175590 70 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm11394-201ENSMUST00000181421 517 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm27254-201ENSMUST00000183926 517 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm38201-201ENSMUST00000192143 387 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm38061-201ENSMUST00000192490 365 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Scn1aA2APX8 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.39□□□□□ -1.71
Scn1aA2APX8 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Scn1aA2APX8 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Scn1aA2APX8 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Scn1aA2APX8 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Scn1aA2APX8 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Scn1aA2APX8 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm14107-201ENSMUST00000117774 330 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Scn1aA2APX8 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 AC114573.1-201ENSMUST00000224120 1210 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Scn1aA2APX8 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.39□□□□□ -1.71
Scn1aA2APX8 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Gm22314-201ENSMUST00000158007 281 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 Gm19898-201ENSMUST00000177490 251 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 Gm23816-201ENSMUST00000179617 132 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 Gm27190-201ENSMUST00000184890 542 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 Gm17953-201ENSMUST00000192061 667 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Gm5548-201ENSMUST00000055878 397 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Gm42520-201ENSMUST00000199642 1502 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Gm13852-201ENSMUST00000122350 242 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Gm5974-201ENSMUST00000181607 986 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 Mir6926-201ENSMUST00000184562 68 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 Gm29598-201ENSMUST00000188996 588 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.38□□□□□ -1.71
Scn1aA2APX8 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Scn1aA2APX8 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.38□□□□□ -1.71
Scn1aA2APX8 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC4.37□□□□□ -1.71
Scn1aA2APX8 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
Scn1aA2APX8 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Scn1aA2APX8 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.37□□□□□ -1.71
Scn1aA2APX8 Gm22269-201ENSMUST00000104002 130 ntBASIC4.37□□□□□ -1.71
Scn1aA2APX8 Gm11200-201ENSMUST00000121698 448 ntBASIC4.37□□□□□ -1.71
Scn1aA2APX8 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Scn1aA2APX8 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Scn1aA2APX8 Mir5128-201ENSMUST00000175217 84 ntBASIC4.37□□□□□ -1.71
Scn1aA2APX8 Gm28471-201ENSMUST00000185994 615 ntBASIC4.37□□□□□ -1.71
Scn1aA2APX8 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.37□□□□□ -1.71
Scn1aA2APX8 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Scn1aA2APX8 Gm37495-201ENSMUST00000194590 264 ntBASIC4.37□□□□□ -1.71
Scn1aA2APX8 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Scn1aA2APX8 Gm5885-202ENSMUST00000203357 528 ntBASIC4.37□□□□□ -1.71
Scn1aA2APX8 Gm19596-201ENSMUST00000203685 739 ntBASIC4.37□□□□□ -1.71
Scn1aA2APX8 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Scn1aA2APX8 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.37□□□□□ -1.71
Scn1aA2APX8 AC166323.1-201ENSMUST00000217756 367 ntBASIC4.37□□□□□ -1.71
Scn1aA2APX8 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.37□□□□□ -1.71
Scn1aA2APX8 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.37□□□□□ -1.71
Scn1aA2APX8 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Scn1aA2APX8 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Scn1aA2APX8 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.37□□□□□ -1.71
Scn1aA2APX8 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.37□□□□□ -1.71
Scn1aA2APX8 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Scn1aA2APX8 Gm42492-201ENSMUST00000195780 2915 ntBASIC4.37□□□□□ -1.71
Scn1aA2APX8 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
Scn1aA2APX8 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms