Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm24142-201ENSMUST00000101960 107 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Mir147-201ENSMUST00000102354 79 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm12073-201ENSMUST00000117382 524 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm15225-201ENSMUST00000120449 1017 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm12893-201ENSMUST00000121732 275 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm22600-201ENSMUST00000157598 269 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm22519-201ENSMUST00000158270 178 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm26828-201ENSMUST00000180640 172 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm28385-201ENSMUST00000185671 292 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm18150-201ENSMUST00000195341 645 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm17766-201ENSMUST00000209223 442 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm46191-201ENSMUST00000218899 433 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 CT025616.1-201ENSMUST00000221158 412 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm4057-201ENSMUST00000221407 368 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 AL589696.1-201ENSMUST00000225711 330 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm25140-201ENSMUST00000083254 140 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm6177-201ENSMUST00000085589 465 ntBASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Trim3Q9R1R2 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Gm12231-201ENSMUST00000119447 695 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Gm15745-201ENSMUST00000119807 115 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Gm12041-201ENSMUST00000121606 602 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Gm25150-201ENSMUST00000157121 60 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Gm26098-201ENSMUST00000157247 288 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Gm26034-201ENSMUST00000158154 116 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Gm22940-201ENSMUST00000158560 155 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Gm29588-201ENSMUST00000185738 298 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Gm6719-201ENSMUST00000202067 335 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Gm43371-201ENSMUST00000202838 1031 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Gm34224-201ENSMUST00000204606 364 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Gm44816-201ENSMUST00000206666 477 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 AC114573.1-201ENSMUST00000224120 1210 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Snora52-201ENSMUST00000082732 137 ntBASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Trim3Q9R1R2 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Trim3Q9R1R2 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Trim3Q9R1R2 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.34□□□□□ -1.72
Trim3Q9R1R2 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Trim3Q9R1R2 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim3Q9R1R2 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.33□□□□□ -1.72
Trim3Q9R1R2 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trim3Q9R1R2 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim3Q9R1R2 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.33□□□□□ -1.72
Trim3Q9R1R2 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.33□□□□□ -1.72
Trim3Q9R1R2 Gm13118-201ENSMUST00000120402 549 ntBASIC4.33□□□□□ -1.72
Trim3Q9R1R2 Gm5353-201ENSMUST00000139800 793 ntBASIC4.33□□□□□ -1.72
Trim3Q9R1R2 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC4.33□□□□□ -1.72
Trim3Q9R1R2 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms