Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm28097-201ENSMUST00000187333 366 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm3489-201ENSMUST00000190083 528 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm36986-201ENSMUST00000195320 353 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm8874-201ENSMUST00000196826 286 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm43524-201ENSMUST00000197278 298 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm2607-201ENSMUST00000212389 627 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm19936-201ENSMUST00000216414 838 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm7530-201ENSMUST00000218466 605 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.98□□□□□ -1.61
Vps28Q9D1C8 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm22020-201ENSMUST00000104358 136 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm7421-201ENSMUST00000119298 639 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm11584-201ENSMUST00000120636 325 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm7365-201ENSMUST00000120877 639 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm25103-201ENSMUST00000122671 318 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm17075-201ENSMUST00000171924 670 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm22693-201ENSMUST00000175049 442 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm18828-202ENSMUST00000181035 310 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 V1rg10-201ENSMUST00000183378 937 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Mir7056-201ENSMUST00000183776 59 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm28872-201ENSMUST00000191518 158 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm38018-201ENSMUST00000195651 540 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm42976-201ENSMUST00000200313 222 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm43136-201ENSMUST00000200403 636 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm32308-201ENSMUST00000203053 280 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 AC151730.2-201ENSMUST00000224027 475 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 CT009733.1-201ENSMUST00000225322 425 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm23302-201ENSMUST00000082710 100 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Vps28Q9D1C8 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.96□□□□□ -1.61
Vps28Q9D1C8 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Vps28Q9D1C8 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Mir804-201ENSMUST00000103251 95 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm24117-201ENSMUST00000103973 133 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm23746-201ENSMUST00000104229 125 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm14771-201ENSMUST00000118249 203 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm12591-201ENSMUST00000122407 1177 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm24371-201ENSMUST00000122662 267 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm23121-201ENSMUST00000157653 173 ntBASIC4.96□□□□□ -1.62
Vps28Q9D1C8 Gm25185-201ENSMUST00000157754 96 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms