Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm25260-201ENSMUST00000083053 134 ntBASIC5.73□□□□□ -1.49
Ccdc9Q8VC31 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc9Q8VC31 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc9Q8VC31 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC5.73□□□□□ -1.49
Ccdc9Q8VC31 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ccdc9Q8VC31 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.73□□□□□ -1.49
Ccdc9Q8VC31 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ccdc9Q8VC31 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.73□□□□□ -1.49
Ccdc9Q8VC31 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm9427-201ENSMUST00000116187 651 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm13386-201ENSMUST00000117677 124 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm11393-201ENSMUST00000118019 288 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Anp32-ps-201ENSMUST00000118265 388 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm12768-201ENSMUST00000120055 759 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm14599-201ENSMUST00000120469 474 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm3757-201ENSMUST00000125878 675 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm26001-201ENSMUST00000157989 103 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm25489-201ENSMUST00000158727 141 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm3025-201ENSMUST00000163454 489 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm3077-201ENSMUST00000165903 627 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm2878-201ENSMUST00000170173 486 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm29320-201ENSMUST00000185235 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm28471-201ENSMUST00000185994 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm29179-202ENSMUST00000186138 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm28598-201ENSMUST00000186490 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm29448-201ENSMUST00000186675 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm29314-201ENSMUST00000186800 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm28683-201ENSMUST00000187134 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm28253-202ENSMUST00000187971 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Olfr1055-202ENSMUST00000188023 939 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm28468-201ENSMUST00000188536 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm29268-201ENSMUST00000188669 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm28840-205ENSMUST00000189320 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm29169-201ENSMUST00000189835 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm28835-203ENSMUST00000190062 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm29218-205ENSMUST00000190846 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm28969-211ENSMUST00000190992 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm28978-201ENSMUST00000191120 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm37172-201ENSMUST00000191926 615 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm43841-201ENSMUST00000199491 586 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm34149-201ENSMUST00000203547 304 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm44221-201ENSMUST00000203552 388 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm46136-201ENSMUST00000214730 565 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm18541-201ENSMUST00000215935 538 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm5347-201ENSMUST00000210542 2327 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm36951-201ENSMUST00000193840 2687 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Gm38260-201ENSMUST00000193573 3995 ntBASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ccdc9Q8VC31 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Ccdc9Q8VC31 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Ccdc9Q8VC31 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Ccdc9Q8VC31 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm14335-201ENSMUST00000119165 810 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm13430-201ENSMUST00000121366 288 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm25332-201ENSMUST00000158038 105 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm24551-201ENSMUST00000158645 92 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm15812-201ENSMUST00000162331 748 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm3216-201ENSMUST00000166927 486 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm3141-201ENSMUST00000168726 499 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC5.71□□□□□ -1.5
Ccdc9Q8VC31 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms