Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm23706-201ENSMUST00000104369 82 ntBASIC7.75□□□□□ -1.17
Trim35Q8C006 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim35Q8C006 Gm11443-201ENSMUST00000118790 479 ntBASIC7.75□□□□□ -1.17
Trim35Q8C006 Gm12219-201ENSMUST00000119198 443 ntBASIC7.75□□□□□ -1.17
Trim35Q8C006 Gm6798-201ENSMUST00000119961 360 ntBASIC7.75□□□□□ -1.17
Trim35Q8C006 Gm9378-201ENSMUST00000120315 471 ntBASIC7.75□□□□□ -1.17
Trim35Q8C006 Gm14156-201ENSMUST00000121538 483 ntBASIC7.75□□□□□ -1.17
Trim35Q8C006 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC7.75□□□□□ -1.17
Trim35Q8C006 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC7.75□□□□□ -1.17
Trim35Q8C006 Mir1231-201ENSMUST00000175639 81 ntBASIC7.75□□□□□ -1.17
Trim35Q8C006 Gm2367-201ENSMUST00000192374 472 ntBASIC7.75□□□□□ -1.17
Trim35Q8C006 Gm36939-201ENSMUST00000194889 439 ntBASIC7.75□□□□□ -1.17
Trim35Q8C006 AC137678.1-201ENSMUST00000198370 118 ntBASIC7.75□□□□□ -1.17
Trim35Q8C006 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim35Q8C006 AC156802.1-201ENSMUST00000223623 579 ntBASIC7.75□□□□□ -1.17
Trim35Q8C006 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim35Q8C006 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim35Q8C006 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Trim35Q8C006 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim35Q8C006 Gm42955-201ENSMUST00000197355 3393 ntBASIC7.75□□□□□ -1.17
Trim35Q8C006 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim35Q8C006 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Trim35Q8C006 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim35Q8C006 Gm9923-201ENSMUST00000217785 1836 ntBASIC7.75□□□□□ -1.17
Trim35Q8C006 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim35Q8C006 Gm37278-201ENSMUST00000191619 2872 ntBASIC7.75□□□□□ -1.17
Trim35Q8C006 Gm37049-201ENSMUST00000194356 1983 ntBASIC7.75□□□□□ -1.17
Trim35Q8C006 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim35Q8C006 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC7.75□□□□□ -1.17
Trim35Q8C006 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim35Q8C006 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Trim35Q8C006 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim35Q8C006 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC7.75□□□□□ -1.17
Trim35Q8C006 Gm17969-201ENSMUST00000185706 2557 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm6820-201ENSMUST00000188803 2173 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Trim35Q8C006 AC121844.3-201ENSMUST00000219124 1785 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim35Q8C006 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Trim35Q8C006 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim35Q8C006 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim35Q8C006 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim35Q8C006 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim35Q8C006 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm33378-201ENSMUST00000219831 2758 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim35Q8C006 AC124421.1-201ENSMUST00000219114 4154 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim35Q8C006 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC7.74□□□□□ -1.17
Trim35Q8C006 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm23422-201ENSMUST00000102000 107 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm12062-201ENSMUST00000117533 259 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm15282-201ENSMUST00000117707 300 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm12944-201ENSMUST00000119262 463 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm13224-201ENSMUST00000119586 94 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Mir1962-201ENSMUST00000157516 121 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm28385-201ENSMUST00000185671 292 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm28751-201ENSMUST00000189287 696 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC7.74□□□□□ -1.17
Trim35Q8C006 Mir7230-201ENSMUST00000195977 56 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm26413-202ENSMUST00000198972 127 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC7.74□□□□□ -1.17
Trim35Q8C006 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trim35Q8C006 Mir146b-201ENSMUST00000093619 109 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim35Q8C006 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim35Q8C006 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm44752-201ENSMUST00000207140 3305 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm44417-201ENSMUST00000203298 3359 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim35Q8C006 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim35Q8C006 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Trim35Q8C006 Gm44996-201ENSMUST00000208787 2980 ntBASIC7.74□□□□□ -1.17
Trim35Q8C006 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trim35Q8C006 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm42700-201ENSMUST00000199071 2437 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm38381-201ENSMUST00000193594 2275 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Trim35Q8C006 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
Trim35Q8C006 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC7.73□□□□□ -1.17
Trim35Q8C006 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm25273-201ENSMUST00000104295 115 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm23319-201ENSMUST00000104467 131 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm23529-201ENSMUST00000104562 132 ntBASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trim35Q8C006 Gm13714-201ENSMUST00000117313 221 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms