Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm4557-201ENSMUST00000185826 907 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm4526-201ENSMUST00000186039 920 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm8708-201ENSMUST00000188500 906 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm28061-201ENSMUST00000189085 807 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm28872-201ENSMUST00000191518 158 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm37631-201ENSMUST00000192275 364 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm43136-201ENSMUST00000200403 636 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm18325-201ENSMUST00000203228 835 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm45236-201ENSMUST00000208632 229 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm45701-201ENSMUST00000212049 235 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm17791-201ENSMUST00000185660 1501 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm38375-201ENSMUST00000194610 2227 ntBASIC4.87□□□□□ -1.63
Ccdc40Q8BI79 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm14706-201ENSMUST00000117744 255 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm12448-201ENSMUST00000118852 655 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm14175-201ENSMUST00000119835 241 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm11894-201ENSMUST00000121579 328 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm13232-201ENSMUST00000121816 632 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm25179-201ENSMUST00000122632 128 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm22819-201ENSMUST00000157445 303 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm26373-201ENSMUST00000157833 103 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm25553-201ENSMUST00000158076 79 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm43724-201ENSMUST00000197516 226 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm43768-201ENSMUST00000198380 1258 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm3690-201ENSMUST00000211341 262 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Snord14e-201ENSMUST00000082857 90 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm6177-201ENSMUST00000085589 465 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm12667-201ENSMUST00000118299 1332 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ccdc40Q8BI79 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Gm13459-201ENSMUST00000121558 646 ntBASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Gm25103-201ENSMUST00000122671 318 ntBASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Gm44237-201ENSMUST00000205183 936 ntBASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Gm18127-201ENSMUST00000208479 725 ntBASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Gm46191-201ENSMUST00000218899 433 ntBASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Prl7a1-203ENSMUST00000224852 1283 ntBASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 CT030254.3-201ENSMUST00000225959 1231 ntBASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 AC166574.3-201ENSMUST00000226725 367 ntBASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Gm23300-201ENSMUST00000082712 125 ntBASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ccdc40Q8BI79 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms