Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Gm20819-201ENSMUST00000191091 925 ntBASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Gm20871-201ENSMUST00000191322 931 ntBASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Trbv28-201ENSMUST00000192804 264 ntBASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Mir142-201ENSMUST00000198092 64 ntBASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 AC159819.1-201ENSMUST00000213911 328 ntBASIC4.78□□□□□ -1.64
Casc4Q6P2L7 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.78□□□□□ -1.64
Casc4Q6P2L7 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Olfr881-201ENSMUST00000074611 948 ntBASIC4.78□□□□□ -1.64
Casc4Q6P2L7 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Casc4Q6P2L7 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.65
Casc4Q6P2L7 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm14706-201ENSMUST00000117744 255 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm23960-201ENSMUST00000157206 131 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Snora81-201ENSMUST00000157310 178 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm24854-201ENSMUST00000158025 98 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm5558-201ENSMUST00000178933 495 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm8604-201ENSMUST00000183150 965 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 V1rg10-201ENSMUST00000183378 937 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm21617-201ENSMUST00000188297 691 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm44376-201ENSMUST00000197570 128 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm17937-201ENSMUST00000197908 742 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 AC173345.3-201ENSMUST00000221245 1093 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm3086-202ENSMUST00000221248 310 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm6065-201ENSMUST00000081336 492 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Snora52-201ENSMUST00000082732 137 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm25140-201ENSMUST00000083254 140 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gm6043-201ENSMUST00000099961 492 ntBASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Casc4Q6P2L7 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Gm24124-201ENSMUST00000104103 132 ntBASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Gm15019-201ENSMUST00000120148 434 ntBASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Gm12893-201ENSMUST00000121732 275 ntBASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Gm15905-201ENSMUST00000137042 298 ntBASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Casc4Q6P2L7 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms