Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 AC161252.2-201ENSMUST00000224978 374 ntBASIC7.81□□□□□ -1.16
Clcn1Q64347 AC107711.2-203ENSMUST00000227827 762 ntBASIC7.81□□□□□ -1.16
Clcn1Q64347 AC102291.2-201ENSMUST00000228083 367 ntBASIC7.81□□□□□ -1.16
Clcn1Q64347 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Clcn1Q64347 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Clcn1Q64347 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Clcn1Q64347 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
Clcn1Q64347 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Clcn1Q64347 Gm43330-201ENSMUST00000199706 2153 ntBASIC7.81□□□□□ -1.16
Clcn1Q64347 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Clcn1Q64347 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Clcn1Q64347 Gm40020-201ENSMUST00000215677 1635 ntBASIC7.81□□□□□ -1.16
Clcn1Q64347 AC110043.1-201ENSMUST00000220278 1627 ntBASIC7.81□□□□□ -1.16
Clcn1Q64347 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Clcn1Q64347 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Clcn1Q64347 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Clcn1Q64347 Gm44584-201ENSMUST00000208395 2880 ntBASIC7.81□□□□□ -1.16
Clcn1Q64347 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Clcn1Q64347 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Clcn1Q64347 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
Clcn1Q64347 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm45149-201ENSMUST00000206459 2172 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm7155-201ENSMUST00000121143 1671 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
Clcn1Q64347 Malat1-201ENSMUST00000172812 6983 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC7.8□□□□□ -1.16
Clcn1Q64347 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Clcn1Q64347 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Clcn1Q64347 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Clcn1Q64347 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC7.8□□□□□ -1.16
Clcn1Q64347 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Clcn1Q64347 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm8501-201ENSMUST00000117684 432 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm14521-201ENSMUST00000119545 350 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm25384-201ENSMUST00000157807 105 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm25906-201ENSMUST00000158489 126 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm23408-201ENSMUST00000158523 265 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm10074-201ENSMUST00000174543 249 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Mir3572-201ENSMUST00000175549 86 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm22851-201ENSMUST00000178741 94 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC7.8□□□□□ -1.16
Clcn1Q64347 LOC665443-201ENSMUST00000212284 796 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm18696-201ENSMUST00000220103 274 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm10095-201ENSMUST00000222765 483 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 AC124433.2-201ENSMUST00000223867 291 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 AC139350.4-201ENSMUST00000228483 798 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm5341-201ENSMUST00000058881 489 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm24316-201ENSMUST00000083041 107 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm42607-201ENSMUST00000200221 3393 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Clcn1Q64347 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC7.8□□□□□ -1.16
Clcn1Q64347 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Clcn1Q64347 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Clcn1Q64347 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Clcn1Q64347 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Clcn1Q64347 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Clcn1Q64347 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Clcn1Q64347 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm20300-201ENSMUST00000214634 3440 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Clcn1Q64347 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Clcn1Q64347 n-R5s82-201ENSMUST00000104213 109 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 Mir466f-4-201ENSMUST00000116930 121 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm11344-201ENSMUST00000122011 335 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm23792-201ENSMUST00000122557 93 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Clcn1Q64347 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm8816-201ENSMUST00000182280 1163 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm28995-201ENSMUST00000186625 261 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm29229-201ENSMUST00000188874 323 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm7858-201ENSMUST00000190177 622 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm2719-201ENSMUST00000191929 444 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm37173-201ENSMUST00000194498 1017 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm45870-201ENSMUST00000211269 601 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 AC122188.1-201ENSMUST00000217534 312 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC7.79□□□□□ -1.16
Clcn1Q64347 AC154552.4-201ENSMUST00000222171 151 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 AC154510.1-201ENSMUST00000223925 737 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 AC154556.1-201ENSMUST00000224587 885 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 CT025667.1-201ENSMUST00000225872 382 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 AC154484.2-201ENSMUST00000228359 818 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 AC117588.3-201ENSMUST00000228517 325 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 Gm16335-201ENSMUST00000077495 309 ntBASIC7.79□□□□□ -1.16
Clcn1Q64347 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Clcn1Q64347 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms