Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trim28Q62318 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim28Q62318 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Trim28Q62318 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Trim28Q62318 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim28Q62318 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Trim28Q62318 Gm11406-201ENSMUST00000117418 484 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Gm14898-201ENSMUST00000120202 645 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Gm11584-201ENSMUST00000120636 325 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Trim28Q62318 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC6.26□□□□□ -1.41
Trim28Q62318 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC6.26□□□□□ -1.41
Trim28Q62318 Gm16300-201ENSMUST00000160031 1279 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim28Q62318 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Trim28Q62318 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim28Q62318 Gm27875-201ENSMUST00000184425 123 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Gm4557-201ENSMUST00000185826 907 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Gm4526-201ENSMUST00000186039 920 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Gm28871-201ENSMUST00000186191 687 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC6.26□□□□□ -1.41
Trim28Q62318 Gm8708-201ENSMUST00000188500 906 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim28Q62318 Gm37123-201ENSMUST00000192994 1171 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Trav15d-3-201ENSMUST00000198604 167 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Gm42643-201ENSMUST00000200504 279 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC6.26□□□□□ -1.41
Trim28Q62318 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC6.26□□□□□ -1.41
Trim28Q62318 Gm45912-201ENSMUST00000210646 543 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Gm45965-201ENSMUST00000221192 1284 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 AC154335.2-201ENSMUST00000225916 638 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Trim28Q62318 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
Trim28Q62318 Gm37762-201ENSMUST00000194515 3561 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim28Q62318 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Trim28Q62318 Gm35629-201ENSMUST00000209684 2241 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim28Q62318 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim28Q62318 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim28Q62318 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Trim28Q62318 Gm37607-201ENSMUST00000194925 2623 ntBASIC6.26□□□□□ -1.41
Trim28Q62318 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim28Q62318 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim28Q62318 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim28Q62318 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim28Q62318 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Trim28Q62318 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim28Q62318 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim28Q62318 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim28Q62318 Gm14932-201ENSMUST00000117112 453 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 Gm15779-201ENSMUST00000117470 412 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 Gm13311-201ENSMUST00000117863 379 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 Gm15745-201ENSMUST00000119807 115 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 Gm11484-201ENSMUST00000119808 338 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 Gm12466-201ENSMUST00000121199 620 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 Gm13220-201ENSMUST00000121535 508 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 Gm24774-201ENSMUST00000157384 134 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Trim28Q62318 Gm20203-201ENSMUST00000192352 332 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC6.25□□□□□ -1.41
Trim28Q62318 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC6.25□□□□□ -1.41
Trim28Q62318 Gm5373-201ENSMUST00000212113 1050 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 AC122901.2-201ENSMUST00000216926 285 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Trim28Q62318 AC124356.2-201ENSMUST00000221874 336 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 AC112972.1-201ENSMUST00000227329 365 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
Trim28Q62318 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Trim28Q62318 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Trim28Q62318 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC6.25□□□□□ -1.41
Trim28Q62318 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim28Q62318 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Trim28Q62318 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim28Q62318 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim28Q62318 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Trim28Q62318 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.25□□□□□ -1.41
Trim28Q62318 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Trim28Q62318 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC6.25□□□□□ -1.41
Trim28Q62318 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC6.25□□□□□ -1.41
Trim28Q62318 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC6.25□□□□□ -1.41
Trim28Q62318 AC113059.3-201ENSMUST00000217423 2777 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Trim28Q62318 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim28Q62318 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Trim28Q62318 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim28Q62318 Gm37226-201ENSMUST00000191644 3255 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Gm5746-201ENSMUST00000183550 2200 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim28Q62318 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Trim28Q62318 Gm14607-201ENSMUST00000119119 491 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Trim28Q62318 Gm14800-201ENSMUST00000122084 1272 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms