Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Upf3aQ3ULJ3 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.73□□□□□ -1.65
Upf3aQ3ULJ3 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Upf3aQ3ULJ3 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Upf3aQ3ULJ3 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.73□□□□□ -1.65
Upf3aQ3ULJ3 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Upf3aQ3ULJ3 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Upf3aQ3ULJ3 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Upf3aQ3ULJ3 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Gm13737-201ENSMUST00000119793 232 ntBASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Gm26219-201ENSMUST00000175216 71 ntBASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Gm28871-201ENSMUST00000186191 687 ntBASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Gm21617-201ENSMUST00000188297 691 ntBASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Gm37881-201ENSMUST00000193001 421 ntBASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Gm18320-201ENSMUST00000211304 595 ntBASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.72□□□□□ -1.65
Upf3aQ3ULJ3 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.71□□□□□ -1.65
Upf3aQ3ULJ3 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Upf3aQ3ULJ3 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Upf3aQ3ULJ3 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Upf3aQ3ULJ3 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm12062-201ENSMUST00000117533 259 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm15426-201ENSMUST00000117823 556 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm8129-201ENSMUST00000118230 213 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm16420-201ENSMUST00000120258 856 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm6027-201ENSMUST00000121467 756 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm22204-201ENSMUST00000122654 327 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm25965-201ENSMUST00000157170 93 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm24961-201ENSMUST00000157918 184 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm25714-201ENSMUST00000158626 296 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm4134-201ENSMUST00000173244 563 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm38053-201ENSMUST00000193938 160 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Trbv11-201ENSMUST00000194354 260 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm42694-201ENSMUST00000196951 358 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm45727-201ENSMUST00000212886 572 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm19073-201ENSMUST00000219978 555 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm23623-201ENSMUST00000082461 107 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Upf3aQ3ULJ3 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Gm22269-201ENSMUST00000104002 130 ntBASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Snora64-201ENSMUST00000104521 134 ntBASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Gm25386-201ENSMUST00000157814 288 ntBASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Gm25224-201ENSMUST00000158195 68 ntBASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Gm29031-201ENSMUST00000185316 614 ntBASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Gm29000-201ENSMUST00000185444 614 ntBASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Gm28204-201ENSMUST00000185934 614 ntBASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Gm28290-201ENSMUST00000186505 614 ntBASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Gm28161-201ENSMUST00000186669 614 ntBASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Gm28749-209ENSMUST00000189599 614 ntBASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Gm7449-201ENSMUST00000194393 663 ntBASIC4.7□□□□□ -1.66
Upf3aQ3ULJ3 Gm33163-201ENSMUST00000194504 614 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms