Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm37606-201ENSMUST00000191816 3116 ntBASIC7.36□□□□□ -1.23
Col17a1Q07563 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col17a1Q07563 Gm15916-201ENSMUST00000118355 736 ntBASIC7.36□□□□□ -1.23
Col17a1Q07563 Gm23755-201ENSMUST00000157578 343 ntBASIC7.36□□□□□ -1.23
Col17a1Q07563 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC7.36□□□□□ -1.23
Col17a1Q07563 Gm17152-201ENSMUST00000172430 535 ntBASIC7.36□□□□□ -1.23
Col17a1Q07563 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col17a1Q07563 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC7.36□□□□□ -1.23
Col17a1Q07563 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC7.36□□□□□ -1.23
Col17a1Q07563 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC7.36□□□□□ -1.23
Col17a1Q07563 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC7.36□□□□□ -1.23
Col17a1Q07563 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC7.36□□□□□ -1.23
Col17a1Q07563 Gm7119-201ENSMUST00000221345 695 ntBASIC7.36□□□□□ -1.23
Col17a1Q07563 AC164618.1-201ENSMUST00000225769 592 ntBASIC7.36□□□□□ -1.23
Col17a1Q07563 AC121542.1-201ENSMUST00000227245 721 ntBASIC7.36□□□□□ -1.23
Col17a1Q07563 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Col17a1Q07563 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Col17a1Q07563 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC7.36□□□□□ -1.23
Col17a1Q07563 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Col17a1Q07563 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Col17a1Q07563 AC153144.1-201ENSMUST00000221759 3139 ntBASIC7.35□□□□□ -1.23
Col17a1Q07563 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col17a1Q07563 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC7.35□□□□□ -1.23
Col17a1Q07563 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col17a1Q07563 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Col17a1Q07563 AC169038.1-201ENSMUST00000227378 1352 ntBASIC7.35□□□□□ -1.23
Col17a1Q07563 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Col17a1Q07563 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col17a1Q07563 Gm37023-201ENSMUST00000192895 2426 ntBASIC7.35□□□□□ -1.23
Col17a1Q07563 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Col17a1Q07563 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col17a1Q07563 Gm26418-201ENSMUST00000104275 137 ntBASIC7.35□□□□□ -1.23
Col17a1Q07563 Gm15076-201ENSMUST00000117076 474 ntBASIC7.35□□□□□ -1.23
Col17a1Q07563 Gm16106-201ENSMUST00000119187 294 ntBASIC7.35□□□□□ -1.23
Col17a1Q07563 Gm24363-201ENSMUST00000158440 311 ntBASIC7.35□□□□□ -1.23
Col17a1Q07563 Gm23773-201ENSMUST00000158985 296 ntBASIC7.35□□□□□ -1.23
Col17a1Q07563 Gm24925-201ENSMUST00000178157 107 ntBASIC7.35□□□□□ -1.23
Col17a1Q07563 Mir6345-201ENSMUST00000184286 128 ntBASIC7.35□□□□□ -1.23
Col17a1Q07563 Mir6385-201ENSMUST00000184295 105 ntBASIC7.35□□□□□ -1.23
Col17a1Q07563 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col17a1Q07563 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC7.35□□□□□ -1.23
Col17a1Q07563 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC7.35□□□□□ -1.23
Col17a1Q07563 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC7.35□□□□□ -1.23
Col17a1Q07563 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC7.35□□□□□ -1.23
Col17a1Q07563 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Col17a1Q07563 AC080021.1-201ENSMUST00000228104 700 ntBASIC7.35□□□□□ -1.23
Col17a1Q07563 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col17a1Q07563 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col17a1Q07563 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Col17a1Q07563 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Col17a1Q07563 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Col17a1Q07563 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC7.34□□□□□ -1.23
Col17a1Q07563 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col17a1Q07563 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col17a1Q07563 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col17a1Q07563 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col17a1Q07563 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col17a1Q07563 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Col17a1Q07563 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC7.34□□□□□ -1.23
Col17a1Q07563 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col17a1Q07563 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Col17a1Q07563 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Col17a1Q07563 Gm42702-201ENSMUST00000199515 4217 ntBASIC7.34□□□□□ -1.23
Col17a1Q07563 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col17a1Q07563 Gm43588-201ENSMUST00000201862 2298 ntBASIC7.34□□□□□ -1.23
Col17a1Q07563 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Col17a1Q07563 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col17a1Q07563 Gm11389-201ENSMUST00000121407 430 ntBASIC7.34□□□□□ -1.23
Col17a1Q07563 Gm15878-201ENSMUST00000127561 306 ntBASIC7.34□□□□□ -1.23
Col17a1Q07563 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC7.34□□□□□ -1.23
Col17a1Q07563 Gm24774-201ENSMUST00000157384 134 ntBASIC7.34□□□□□ -1.23
Col17a1Q07563 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC7.34□□□□□ -1.23
Col17a1Q07563 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC7.34□□□□□ -1.23
Col17a1Q07563 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC7.34□□□□□ -1.23
Col17a1Q07563 Gm22897-202ENSMUST00000197782 127 ntBASIC7.34□□□□□ -1.23
Col17a1Q07563 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
Col17a1Q07563 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC7.34□□□□□ -1.23
Col17a1Q07563 Gm3338-201ENSMUST00000220982 269 ntBASIC7.34□□□□□ -1.23
Col17a1Q07563 AC129935.1-201ENSMUST00000226302 873 ntBASIC7.34□□□□□ -1.23
Col17a1Q07563 Gm26203-201ENSMUST00000082911 114 ntBASIC7.34□□□□□ -1.23
Col17a1Q07563 Gm22739-201ENSMUST00000083437 160 ntBASIC7.34□□□□□ -1.23
Col17a1Q07563 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Col17a1Q07563 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col17a1Q07563 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col17a1Q07563 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col17a1Q07563 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Col17a1Q07563 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC7.34□□□□□ -1.23
Col17a1Q07563 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col17a1Q07563 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Col17a1Q07563 AC125095.1-201ENSMUST00000228387 2020 ntBASIC7.34□□□□□ -1.23
Col17a1Q07563 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Col17a1Q07563 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Col17a1Q07563 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Col17a1Q07563 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
Col17a1Q07563 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col17a1Q07563 Robo2-210ENSMUST00000226478 8059 ntBASIC7.33□□□□□ -1.24
Col17a1Q07563 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Col17a1Q07563 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Col17a1Q07563 Gm43870-201ENSMUST00000205102 4369 ntBASIC7.33□□□□□ -1.24
Col17a1Q07563 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms