Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Mir466n-201ENSMUST00000104798 94 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Gm25848-201ENSMUST00000116790 144 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Gm12814-201ENSMUST00000117091 846 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC5.72□□□□□ -1.49
Sox9Q04887 Gm7421-201ENSMUST00000119298 639 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Gm11252-201ENSMUST00000120572 939 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Gm7365-201ENSMUST00000120877 639 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Gm4852-201ENSMUST00000121202 729 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Gm13009-201ENSMUST00000121307 267 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Gm11344-201ENSMUST00000122011 335 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Gm22478-201ENSMUST00000122570 154 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Gm23212-201ENSMUST00000122718 60 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.72□□□□□ -1.49
Sox9Q04887 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC5.72□□□□□ -1.49
Sox9Q04887 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Sox9Q04887 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC5.72□□□□□ -1.49
Sox9Q04887 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sox9Q04887 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox9Q04887 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox9Q04887 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Sox9Q04887 Gm27538-201ENSMUST00000185065 294 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox9Q04887 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC5.72□□□□□ -1.49
Sox9Q04887 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.72□□□□□ -1.49
Sox9Q04887 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox9Q04887 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC5.72□□□□□ -1.49
Sox9Q04887 Gm37837-201ENSMUST00000191743 604 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.72□□□□□ -1.49
Sox9Q04887 Gm18557-201ENSMUST00000218710 433 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sox9Q04887 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sox9Q04887 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Sox9Q04887 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sox9Q04887 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox9Q04887 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
Sox9Q04887 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sox9Q04887 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sox9Q04887 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sox9Q04887 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox9Q04887 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.72□□□□□ -1.49
Sox9Q04887 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.72□□□□□ -1.49
Sox9Q04887 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sox9Q04887 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox9Q04887 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Sox9Q04887 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Sox9Q04887 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.71□□□□□ -1.49
Sox9Q04887 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Sox9Q04887 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Sox9Q04887 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Sox9Q04887 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sox9Q04887 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sox9Q04887 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Sox9Q04887 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Sox9Q04887 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Sox9Q04887 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sox9Q04887 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sox9Q04887 Gm15108-201ENSMUST00000116160 803 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm11774-201ENSMUST00000118601 293 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm13338-201ENSMUST00000120235 361 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm14907-201ENSMUST00000121948 854 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm12045-201ENSMUST00000122122 573 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Scarna13-201ENSMUST00000158164 275 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Sox9Q04887 Gm24103-201ENSMUST00000174930 77 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Mup-ps7-201ENSMUST00000178292 545 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Mup-ps8-201ENSMUST00000178663 545 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Mup-ps9-201ENSMUST00000178847 545 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Sox9Q04887 Gm21816-201ENSMUST00000179255 360 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Mup-ps6-201ENSMUST00000179564 545 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm11392-201ENSMUST00000181419 710 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Mir7685-201ENSMUST00000183555 62 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Mir6907-201ENSMUST00000183764 71 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm3454-201ENSMUST00000185571 412 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm28560-201ENSMUST00000186091 315 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm28334-201ENSMUST00000186653 315 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm28495-201ENSMUST00000188452 315 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm28232-201ENSMUST00000188683 315 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC5.71□□□□□ -1.5
Sox9Q04887 Gm28481-201ENSMUST00000189231 315 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm29059-201ENSMUST00000191534 315 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm28655-201ENSMUST00000191538 692 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm37765-201ENSMUST00000192395 315 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm37237-201ENSMUST00000192893 315 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm36968-201ENSMUST00000193737 315 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm38146-201ENSMUST00000194121 1293 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm38290-201ENSMUST00000195238 315 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm43350-201ENSMUST00000196382 711 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC5.71□□□□□ -1.5
Sox9Q04887 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sox9Q04887 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.71□□□□□ -1.5
Sox9Q04887 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.71□□□□□ -1.5
Sox9Q04887 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms