Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Tpm1P58771 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC4.8□□□□□ -1.64
Tpm1P58771 Gm22243-201ENSMUST00000178754 120 ntBASIC4.8□□□□□ -1.64
Tpm1P58771 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Tpm1P58771 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.8□□□□□ -1.64
Tpm1P58771 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.8□□□□□ -1.64
Tpm1P58771 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.8□□□□□ -1.64
Tpm1P58771 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.8□□□□□ -1.64
Tpm1P58771 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Tpm1P58771 Gm18409-202ENSMUST00000220105 529 ntBASIC4.8□□□□□ -1.64
Tpm1P58771 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.8□□□□□ -1.64
Tpm1P58771 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.8□□□□□ -1.64
Tpm1P58771 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Tpm1P58771 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Tpm1P58771 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Tpm1P58771 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Tpm1P58771 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Tpm1P58771 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Tpm1P58771 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.79□□□□□ -1.64
Tpm1P58771 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Tpm1P58771 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.79□□□□□ -1.64
Tpm1P58771 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Tpm1P58771 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Tpm1P58771 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Tpm1P58771 Gm25096-201ENSMUST00000104043 129 ntBASIC4.79□□□□□ -1.64
Tpm1P58771 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Tpm1P58771 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Tpm1P58771 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.79□□□□□ -1.64
Tpm1P58771 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Tpm1P58771 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Tpm1P58771 Gm23250-201ENSMUST00000157444 267 ntBASIC4.79□□□□□ -1.64
Tpm1P58771 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Tpm1P58771 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.79□□□□□ -1.64
Tpm1P58771 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.79□□□□□ -1.64
Tpm1P58771 Gm37050-201ENSMUST00000193464 466 ntBASIC4.79□□□□□ -1.64
Tpm1P58771 Gm18382-201ENSMUST00000194394 582 ntBASIC4.79□□□□□ -1.64
Tpm1P58771 Gm42566-201ENSMUST00000197120 643 ntBASIC4.79□□□□□ -1.64
Tpm1P58771 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.79□□□□□ -1.64
Tpm1P58771 Gm17956-201ENSMUST00000199931 838 ntBASIC4.79□□□□□ -1.64
Tpm1P58771 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.79□□□□□ -1.64
Tpm1P58771 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Tpm1P58771 Gm18127-201ENSMUST00000208479 725 ntBASIC4.79□□□□□ -1.64
Tpm1P58771 Gm44845-201ENSMUST00000208773 335 ntBASIC4.79□□□□□ -1.64
Tpm1P58771 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Tpm1P58771 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC4.79□□□□□ -1.64
Tpm1P58771 AC132384.6-201ENSMUST00000218976 1206 ntBASIC4.79□□□□□ -1.64
Tpm1P58771 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Tpm1P58771 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Tpm1P58771 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.79□□□□□ -1.64
Tpm1P58771 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.79□□□□□ -1.64
Tpm1P58771 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Tpm1P58771 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Tpm1P58771 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Tpm1P58771 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.78□□□□□ -1.64
Tpm1P58771 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Tpm1P58771 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Tpm1P58771 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Tpm1P58771 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Tpm1P58771 Gm12931-201ENSMUST00000117046 324 ntBASIC4.78□□□□□ -1.64
Tpm1P58771 Gm11914-201ENSMUST00000117094 507 ntBASIC4.78□□□□□ -1.64
Tpm1P58771 Gm15180-201ENSMUST00000117745 492 ntBASIC4.78□□□□□ -1.64
Tpm1P58771 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.78□□□□□ -1.64
Tpm1P58771 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.78□□□□□ -1.64
Tpm1P58771 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Tpm1P58771 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Tpm1P58771 Gm27543-201ENSMUST00000183562 177 ntBASIC4.78□□□□□ -1.64
Tpm1P58771 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Tpm1P58771 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Tpm1P58771 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Tpm1P58771 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Tpm1P58771 Gm29138-201ENSMUST00000191444 348 ntBASIC4.78□□□□□ -1.64
Tpm1P58771 Gm37961-201ENSMUST00000192729 299 ntBASIC4.78□□□□□ -1.64
Tpm1P58771 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.78□□□□□ -1.64
Tpm1P58771 Gm43037-201ENSMUST00000196808 250 ntBASIC4.78□□□□□ -1.64
Tpm1P58771 Gm42999-201ENSMUST00000198049 786 ntBASIC4.78□□□□□ -1.64
Tpm1P58771 Gm45610-201ENSMUST00000209227 784 ntBASIC4.78□□□□□ -1.64
Tpm1P58771 Gm18789-201ENSMUST00000216115 550 ntBASIC4.78□□□□□ -1.64
Tpm1P58771 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.78□□□□□ -1.64
Tpm1P58771 Gm19073-201ENSMUST00000219978 555 ntBASIC4.78□□□□□ -1.64
Tpm1P58771 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.78□□□□□ -1.64
Tpm1P58771 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.78□□□□□ -1.64
Tpm1P58771 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.78□□□□□ -1.64
Tpm1P58771 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Tpm1P58771 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Tpm1P58771 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Tpm1P58771 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.78□□□□□ -1.64
Tpm1P58771 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Tpm1P58771 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Tpm1P58771 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Tpm1P58771 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Tpm1P58771 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Tpm1P58771 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Tpm1P58771 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Tpm1P58771 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.65
Tpm1P58771 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.77□□□□□ -1.65
Tpm1P58771 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.77□□□□□ -1.65
Tpm1P58771 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Tpm1P58771 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Tpm1P58771 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Tpm1P58771 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms