Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NcanP55066 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC5□□□□□ -1.61
NcanP55066 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
NcanP55066 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
NcanP55066 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5□□□□□ -1.61
NcanP55066 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NcanP55066 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC4.99□□□□□ -1.61
NcanP55066 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NcanP55066 Gm37370-201ENSMUST00000191996 1410 ntBASIC4.99□□□□□ -1.61
NcanP55066 AC122357.2-201ENSMUST00000220732 1525 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NcanP55066 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
NcanP55066 AC124569.3-201ENSMUST00000224860 1621 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm14576-201ENSMUST00000118073 1111 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm14930-201ENSMUST00000118864 652 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm14788-201ENSMUST00000119457 375 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.99□□□□□ -1.61
NcanP55066 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.99□□□□□ -1.61
NcanP55066 Gm25965-201ENSMUST00000157170 93 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC4.99□□□□□ -1.61
NcanP55066 Gm28781-201ENSMUST00000185760 696 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm28339-201ENSMUST00000185845 696 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm29574-201ENSMUST00000186226 696 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm28828-201ENSMUST00000186601 696 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm29307-201ENSMUST00000187367 696 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm29634-201ENSMUST00000188467 696 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm28896-201ENSMUST00000188609 696 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm28699-201ENSMUST00000189193 696 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm29339-201ENSMUST00000189613 696 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm28159-201ENSMUST00000190296 696 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm28803-201ENSMUST00000190385 764 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm29407-201ENSMUST00000191468 696 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm38107-201ENSMUST00000194873 696 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm42999-201ENSMUST00000198049 786 ntBASIC4.99□□□□□ -1.61
NcanP55066 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NcanP55066 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.99□□□□□ -1.61
NcanP55066 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.99□□□□□ -1.61
NcanP55066 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
NcanP55066 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NcanP55066 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NcanP55066 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NcanP55066 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC4.99□□□□□ -1.61
NcanP55066 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NcanP55066 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NcanP55066 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NcanP55066 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.98□□□□□ -1.61
NcanP55066 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NcanP55066 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
NcanP55066 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 Gm7853-201ENSMUST00000100708 478 ntBASIC4.98□□□□□ -1.61
NcanP55066 Gm25764-201ENSMUST00000104092 134 ntBASIC4.98□□□□□ -1.61
NcanP55066 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.98□□□□□ -1.61
NcanP55066 Gm5754-201ENSMUST00000118774 892 ntBASIC4.98□□□□□ -1.61
NcanP55066 Gm16106-201ENSMUST00000119187 294 ntBASIC4.98□□□□□ -1.61
NcanP55066 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NcanP55066 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NcanP55066 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NcanP55066 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.98□□□□□ -1.61
NcanP55066 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NcanP55066 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC4.98□□□□□ -1.61
NcanP55066 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 Gm22897-202ENSMUST00000197782 127 ntBASIC4.98□□□□□ -1.61
NcanP55066 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.98□□□□□ -1.61
NcanP55066 AC153794.2-201ENSMUST00000222650 550 ntBASIC4.98□□□□□ -1.61
NcanP55066 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NcanP55066 AC154838.1-201ENSMUST00000228944 911 ntBASIC4.98□□□□□ -1.61
NcanP55066 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NcanP55066 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NcanP55066 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 Gm23300-201ENSMUST00000082712 125 ntBASIC4.98□□□□□ -1.61
NcanP55066 Gm23058-201ENSMUST00000093703 107 ntBASIC4.98□□□□□ -1.61
NcanP55066 Olfr1160-201ENSMUST00000099839 960 ntBASIC4.98□□□□□ -1.61
NcanP55066 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NcanP55066 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC4.98□□□□□ -1.61
NcanP55066 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NcanP55066 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
NcanP55066 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.98□□□□□ -1.61
NcanP55066 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
NcanP55066 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.97□□□□□ -1.61
NcanP55066 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.97□□□□□ -1.61
NcanP55066 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
NcanP55066 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NcanP55066 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NcanP55066 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.97□□□□□ -1.61
NcanP55066 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NcanP55066 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms