Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.4□□□□□ -1.71
Sox3P53784 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC4.4□□□□□ -1.71
Sox3P53784 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.4□□□□□ -1.71
Sox3P53784 Gm20997-201ENSMUST00000205148 231 ntBASIC4.4□□□□□ -1.71
Sox3P53784 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.4□□□□□ -1.71
Sox3P53784 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sox3P53784 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.4□□□□□ -1.71
Sox3P53784 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.4□□□□□ -1.71
Sox3P53784 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.4□□□□□ -1.71
Sox3P53784 Gm8288-201ENSMUST00000223406 593 ntBASIC4.4□□□□□ -1.71
Sox3P53784 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.4□□□□□ -1.71
Sox3P53784 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.4□□□□□ -1.71
Sox3P53784 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
Sox3P53784 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sox3P53784 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Sox3P53784 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.4□□□□□ -1.71
Sox3P53784 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
Sox3P53784 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
Sox3P53784 AC163296.2-201ENSMUST00000220177 1315 ntBASIC4.4□□□□□ -1.71
Sox3P53784 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.4□□□□□ -1.71
Sox3P53784 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Sox3P53784 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Sox3P53784 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Sox3P53784 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sox3P53784 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sox3P53784 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sox3P53784 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
Sox3P53784 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sox3P53784 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Sox3P53784 Gm24124-201ENSMUST00000104103 132 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sox3P53784 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sox3P53784 Gm12760-201ENSMUST00000117861 482 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Gm4910-201ENSMUST00000119605 366 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Gm12752-201ENSMUST00000121657 811 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sox3P53784 Gm22792-201ENSMUST00000157225 133 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Gm26371-201ENSMUST00000157829 104 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Sox3P53784 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Gm6075-201ENSMUST00000186816 486 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.39□□□□□ -1.71
Sox3P53784 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sox3P53784 Gm29479-201ENSMUST00000190352 455 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Gm28060-201ENSMUST00000191554 189 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Gm44277-201ENSMUST00000205128 649 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sox3P53784 Gm45007-201ENSMUST00000206237 366 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sox3P53784 Gm44648-201ENSMUST00000208267 329 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Gm45434-201ENSMUST00000210550 293 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Gm19885-201ENSMUST00000212853 343 ntBASIC4.39□□□□□ -1.71
Sox3P53784 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.39□□□□□ -1.71
Sox3P53784 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.39□□□□□ -1.71
Sox3P53784 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.39□□□□□ -1.71
Sox3P53784 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.39□□□□□ -1.71
Sox3P53784 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.39□□□□□ -1.71
Sox3P53784 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.39□□□□□ -1.71
Sox3P53784 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Sox3P53784 Gm10916-201ENSMUST00000080330 483 ntBASIC4.39□□□□□ -1.71
Sox3P53784 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Sox3P53784 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sox3P53784 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Sox3P53784 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sox3P53784 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Sox3P53784 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sox3P53784 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
Sox3P53784 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sox3P53784 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sox3P53784 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Sox3P53784 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sox3P53784 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Sox3P53784 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Sox3P53784 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sox3P53784 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Sox3P53784 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.38□□□□□ -1.71
Sox3P53784 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.38□□□□□ -1.71
Sox3P53784 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.38□□□□□ -1.71
Sox3P53784 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.38□□□□□ -1.71
Sox3P53784 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sox3P53784 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.38□□□□□ -1.71
Sox3P53784 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.38□□□□□ -1.71
Sox3P53784 Gm14750-201ENSMUST00000118262 516 ntBASIC4.38□□□□□ -1.71
Sox3P53784 Gm14861-201ENSMUST00000119451 455 ntBASIC4.38□□□□□ -1.71
Sox3P53784 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sox3P53784 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.38□□□□□ -1.71
Sox3P53784 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.38□□□□□ -1.71
Sox3P53784 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sox3P53784 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.38□□□□□ -1.71
Sox3P53784 Gm29228-201ENSMUST00000185489 418 ntBASIC4.38□□□□□ -1.71
Sox3P53784 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.38□□□□□ -1.71
Sox3P53784 Gm37416-201ENSMUST00000193596 318 ntBASIC4.38□□□□□ -1.71
Sox3P53784 Gm42625-201ENSMUST00000198611 922 ntBASIC4.38□□□□□ -1.71
Sox3P53784 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.38□□□□□ -1.71
Sox3P53784 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms