Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC6.77□□□□□ -1.33
Rfx1P48377 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.77□□□□□ -1.33
Rfx1P48377 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.77□□□□□ -1.33
Rfx1P48377 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rfx1P48377 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC6.77□□□□□ -1.33
Rfx1P48377 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC6.77□□□□□ -1.33
Rfx1P48377 Gm2343-201ENSMUST00000161177 1042 ntBASIC6.77□□□□□ -1.33
Rfx1P48377 Gm8224-201ENSMUST00000166178 497 ntBASIC6.77□□□□□ -1.33
Rfx1P48377 Gm25065-201ENSMUST00000177914 132 ntBASIC6.77□□□□□ -1.33
Rfx1P48377 Gm25891-201ENSMUST00000180050 132 ntBASIC6.77□□□□□ -1.33
Rfx1P48377 Gm26898-201ENSMUST00000181678 384 ntBASIC6.77□□□□□ -1.33
Rfx1P48377 Mir6244-201ENSMUST00000184156 117 ntBASIC6.77□□□□□ -1.33
Rfx1P48377 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rfx1P48377 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC6.77□□□□□ -1.33
Rfx1P48377 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.77□□□□□ -1.33
Rfx1P48377 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.77□□□□□ -1.33
Rfx1P48377 Gm43054-201ENSMUST00000199495 884 ntBASIC6.77□□□□□ -1.33
Rfx1P48377 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rfx1P48377 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Rfx1P48377 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Rfx1P48377 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rfx1P48377 CT030184.1-201ENSMUST00000222393 416 ntBASIC6.77□□□□□ -1.33
Rfx1P48377 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.77□□□□□ -1.33
Rfx1P48377 Gm8288-201ENSMUST00000223406 593 ntBASIC6.77□□□□□ -1.33
Rfx1P48377 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rfx1P48377 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.77□□□□□ -1.33
Rfx1P48377 Olfr512-201ENSMUST00000074730 1056 ntBASIC6.77□□□□□ -1.33
Rfx1P48377 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Rfx1P48377 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rfx1P48377 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rfx1P48377 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Rfx1P48377 Gm38278-201ENSMUST00000194715 1365 ntBASIC6.77□□□□□ -1.33
Rfx1P48377 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Rfx1P48377 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rfx1P48377 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Rfx1P48377 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Rfx1P48377 Gm38351-201ENSMUST00000195466 2518 ntBASIC6.77□□□□□ -1.33
Rfx1P48377 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Rfx1P48377 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Rfx1P48377 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Rfx1P48377 AC192616.2-201ENSMUST00000221482 3841 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rfx1P48377 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Rfx1P48377 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Rfx1P48377 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Rfx1P48377 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rfx1P48377 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Rfx1P48377 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC6.76□□□□□ -1.33
Rfx1P48377 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Rfx1P48377 Gm12193-201ENSMUST00000117250 379 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Zfp389-201ENSMUST00000118425 675 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Gm14128-201ENSMUST00000119514 1011 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Gm13482-201ENSMUST00000119842 254 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Gm14970-201ENSMUST00000122289 355 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC6.76□□□□□ -1.33
Rfx1P48377 Gm26106-201ENSMUST00000157254 228 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Gm16298-201ENSMUST00000161107 420 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Rfx1P48377 Gm20519-201ENSMUST00000173684 359 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Rfx1P48377 Gm27158-201ENSMUST00000183813 238 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Rfx1P48377 Gm29216-201ENSMUST00000187117 492 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Gm28974-201ENSMUST00000187893 231 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.76□□□□□ -1.33
Rfx1P48377 Gm38237-201ENSMUST00000193366 376 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Gm37418-201ENSMUST00000195031 274 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Gm35013-201ENSMUST00000197218 832 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Gm43941-201ENSMUST00000203303 1073 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Gm44162-201ENSMUST00000203543 544 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Rfx1P48377 Gm45400-201ENSMUST00000211603 653 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Gm45439-201ENSMUST00000211723 359 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Gm19441-201ENSMUST00000221545 330 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Rfx1P48377 Gm25578-201ENSMUST00000083406 104 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Rfx1P48377 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
Rfx1P48377 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rfx1P48377 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rfx1P48377 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rfx1P48377 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Rfx1P48377 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rfx1P48377 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rfx1P48377 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
Rfx1P48377 Gm19514-201ENSMUST00000206856 4489 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Rfx1P48377 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Rfx1P48377 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Rfx1P48377 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.76□□□□□ -1.33
Rfx1P48377 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Rfx1P48377 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Rfx1P48377 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Rfx1P48377 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Rfx1P48377 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.75□□□□□ -1.33
Rfx1P48377 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Rfx1P48377 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Rfx1P48377 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms