Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HttP42859 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HttP42859 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HttP42859 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HttP42859 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.39□□□□□ -1.71
HttP42859 Gm17966-201ENSMUST00000193453 594 ntBASIC4.39□□□□□ -1.71
HttP42859 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.39□□□□□ -1.71
HttP42859 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HttP42859 AC156802.2-201ENSMUST00000225239 5740 ntBASIC4.38□□□□□ -1.71
HttP42859 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HttP42859 Gm9119-201ENSMUST00000118866 495 ntBASIC4.38□□□□□ -1.71
HttP42859 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HttP42859 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.38□□□□□ -1.71
HttP42859 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HttP42859 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HttP42859 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC4.38□□□□□ -1.71
HttP42859 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HttP42859 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HttP42859 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HttP42859 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HttP42859 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HttP42859 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HttP42859 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HttP42859 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.38□□□□□ -1.71
HttP42859 Gm7853-201ENSMUST00000100708 478 ntBASIC4.38□□□□□ -1.71
HttP42859 Gm11833-201ENSMUST00000118393 853 ntBASIC4.38□□□□□ -1.71
HttP42859 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HttP42859 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.38□□□□□ -1.71
HttP42859 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HttP42859 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HttP42859 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HttP42859 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HttP42859 Gm29365-201ENSMUST00000189461 699 ntBASIC4.38□□□□□ -1.71
HttP42859 Gm17811-201ENSMUST00000206193 387 ntBASIC4.38□□□□□ -1.71
HttP42859 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.38□□□□□ -1.71
HttP42859 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.38□□□□□ -1.71
HttP42859 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HttP42859 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.38□□□□□ -1.71
HttP42859 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HttP42859 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HttP42859 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.37□□□□□ -1.71
HttP42859 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HttP42859 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HttP42859 Gm11718-201ENSMUST00000119942 537 ntBASIC4.37□□□□□ -1.71
HttP42859 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.37□□□□□ -1.71
HttP42859 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.37□□□□□ -1.71
HttP42859 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HttP42859 Gm22889-201ENSMUST00000158639 58 ntBASIC4.37□□□□□ -1.71
HttP42859 Gm22398-201ENSMUST00000174941 125 ntBASIC4.37□□□□□ -1.71
HttP42859 Gm25731-201ENSMUST00000175167 125 ntBASIC4.37□□□□□ -1.71
HttP42859 Gm28190-201ENSMUST00000189766 722 ntBASIC4.37□□□□□ -1.71
HttP42859 Gm43730-201ENSMUST00000199863 372 ntBASIC4.37□□□□□ -1.71
HttP42859 Gm45379-201ENSMUST00000211772 549 ntBASIC4.37□□□□□ -1.71
HttP42859 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
HttP42859 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HttP42859 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.37□□□□□ -1.71
HttP42859 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC4.37□□□□□ -1.71
HttP42859 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HttP42859 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HttP42859 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HttP42859 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.37□□□□□ -1.71
HttP42859 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC4.37□□□□□ -1.71
HttP42859 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.37□□□□□ -1.71
HttP42859 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
HttP42859 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HttP42859 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC4.37□□□□□ -1.71
HttP42859 Gm22857-201ENSMUST00000174969 134 ntBASIC4.37□□□□□ -1.71
HttP42859 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.37□□□□□ -1.71
HttP42859 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.37□□□□□ -1.71
HttP42859 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.37□□□□□ -1.71
HttP42859 Gm18529-201ENSMUST00000193025 1257 ntBASIC4.37□□□□□ -1.71
HttP42859 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.37□□□□□ -1.71
HttP42859 Gm19908-201ENSMUST00000204684 391 ntBASIC4.37□□□□□ -1.71
HttP42859 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC4.37□□□□□ -1.71
HttP42859 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.37□□□□□ -1.71
HttP42859 Gm8231-201ENSMUST00000221617 783 ntBASIC4.37□□□□□ -1.71
HttP42859 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HttP42859 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HttP42859 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HttP42859 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HttP42859 Gm15466-201ENSMUST00000122299 333 ntBASIC4.37□□□□□ -1.71
HttP42859 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.37□□□□□ -1.71
HttP42859 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.37□□□□□ -1.71
HttP42859 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HttP42859 Gm9765-201ENSMUST00000043170 321 ntBASIC4.37□□□□□ -1.71
HttP42859 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HttP42859 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.36□□□□□ -1.71
HttP42859 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HttP42859 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HttP42859 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HttP42859 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HttP42859 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
HttP42859 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HttP42859 Gm14575-201ENSMUST00000117210 560 ntBASIC4.36□□□□□ -1.71
HttP42859 Gm44611-201ENSMUST00000207507 355 ntBASIC4.36□□□□□ -1.71
HttP42859 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HttP42859 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.36□□□□□ -1.71
HttP42859 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HttP42859 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HttP42859 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms