Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm46191-201ENSMUST00000218899 433 ntBASIC4.04□□□□□ -1.76
P20040 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.04□□□□□ -1.76
P20040 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC4.04□□□□□ -1.76
P20040 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.04□□□□□ -1.76
P20040 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
P20040 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
P20040 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.04□□□□□ -1.76
P20040 Gm25005-201ENSMUST00000083812 156 ntBASIC4.04□□□□□ -1.76
P20040 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
P20040 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
P20040 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
P20040 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
P20040 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
P20040 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
P20040 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
P20040 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
P20040 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
P20040 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
P20040 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.04□□□□□ -1.76
P20040 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
P20040 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
P20040 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
P20040 Gm44286-201ENSMUST00000204098 1487 ntBASIC4.04□□□□□ -1.76
P20040 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.04□□□□□ -1.76
P20040 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
P20040 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
P20040 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.04□□□□□ -1.76
P20040 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
P20040 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.03□□□□□ -1.76
P20040 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.03□□□□□ -1.76
P20040 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.03□□□□□ -1.76
P20040 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.03□□□□□ -1.76
P20040 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
P20040 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
P20040 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.03□□□□□ -1.76
P20040 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
P20040 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
P20040 Gm12978-201ENSMUST00000121250 522 ntBASIC4.03□□□□□ -1.76
P20040 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
P20040 Snora81-201ENSMUST00000157310 178 ntBASIC4.03□□□□□ -1.76
P20040 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
P20040 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
P20040 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
P20040 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
P20040 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
P20040 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
P20040 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.03□□□□□ -1.76
P20040 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
P20040 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
P20040 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.03□□□□□ -1.76
P20040 Gm28830-201ENSMUST00000188192 213 ntBASIC4.03□□□□□ -1.76
P20040 Gm38166-201ENSMUST00000191660 471 ntBASIC4.03□□□□□ -1.76
P20040 Gm34224-201ENSMUST00000204606 364 ntBASIC4.03□□□□□ -1.76
P20040 Gm44237-201ENSMUST00000205183 936 ntBASIC4.03□□□□□ -1.76
P20040 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.03□□□□□ -1.76
P20040 Gm17766-201ENSMUST00000209223 442 ntBASIC4.03□□□□□ -1.76
P20040 Gm7128-201ENSMUST00000211639 533 ntBASIC4.03□□□□□ -1.76
P20040 Gm45701-201ENSMUST00000212049 235 ntBASIC4.03□□□□□ -1.76
P20040 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.03□□□□□ -1.76
P20040 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.03□□□□□ -1.76
P20040 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.03□□□□□ -1.76
P20040 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
P20040 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
P20040 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
P20040 Gm22826-201ENSMUST00000083774 165 ntBASIC4.03□□□□□ -1.76
P20040 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.03□□□□□ -1.76
P20040 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.03□□□□□ -1.76
P20040 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
P20040 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.03□□□□□ -1.76
P20040 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
P20040 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
P20040 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
P20040 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
P20040 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
P20040 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.03□□□□□ -1.76
P20040 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
P20040 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
P20040 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.02□□□□□ -1.77
P20040 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
P20040 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
P20040 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.02□□□□□ -1.77
P20040 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.02□□□□□ -1.77
P20040 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.02□□□□□ -1.77
P20040 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
P20040 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
P20040 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
P20040 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.02□□□□□ -1.77
P20040 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
P20040 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
P20040 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
P20040 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
P20040 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
P20040 Gm24124-201ENSMUST00000104103 132 ntBASIC4.02□□□□□ -1.77
P20040 Gm26376-201ENSMUST00000104784 110 ntBASIC4.02□□□□□ -1.77
P20040 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
P20040 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
P20040 Gm13386-201ENSMUST00000117677 124 ntBASIC4.02□□□□□ -1.77
P20040 Gm14706-201ENSMUST00000117744 255 ntBASIC4.02□□□□□ -1.77
P20040 Gm8475-201ENSMUST00000118211 526 ntBASIC4.02□□□□□ -1.77
P20040 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms