Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28596-201ENSMUST00000185870 696 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28604-201ENSMUST00000186629 484 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28566-201ENSMUST00000186714 484 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28194-201ENSMUST00000187412 484 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28886-202ENSMUST00000187889 484 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28191-201ENSMUST00000189112 211 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28554-202ENSMUST00000189175 484 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm29213-202ENSMUST00000189703 484 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28851-202ENSMUST00000189757 484 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28461-201ENSMUST00000190023 484 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm32295-201ENSMUST00000192558 696 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm31260-201ENSMUST00000193478 696 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm5309-201ENSMUST00000197416 677 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm18611-201ENSMUST00000200334 1118 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm17988-201ENSMUST00000208796 535 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.66□□□□□ -1.82
Sdc1P18828 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC3.66□□□□□ -1.82
Sdc1P18828 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Sdc1P18828 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Sdc1P18828 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Sdc1P18828 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Sdc1P18828 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.66□□□□□ -1.82
Sdc1P18828 Mir449a-201ENSMUST00000083641 91 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC3.66□□□□□ -1.82
Sdc1P18828 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Sdc1P18828 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sdc1P18828 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
Sdc1P18828 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Sdc1P18828 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
Sdc1P18828 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms