Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Cdx1P18111 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC3.88□□□□□ -1.79
Cdx1P18111 Gm19029-201ENSMUST00000189923 564 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm28060-201ENSMUST00000191554 189 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm5309-201ENSMUST00000197416 677 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Mir409-201ENSMUST00000198153 79 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm5288-201ENSMUST00000198323 1119 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm44776-201ENSMUST00000207212 381 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm7407-201ENSMUST00000208301 568 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Cdx1P18111 Gm21041-201ENSMUST00000214829 823 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Cdx1P18111 AC155808.1-201ENSMUST00000219288 409 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC3.88□□□□□ -1.79
Cdx1P18111 AC154436.2-201ENSMUST00000227408 208 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Cdx1P18111 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Cdx1P18111 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Cdx1P18111 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Cdx1P18111 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Cdx1P18111 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Cdx1P18111 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Cdx1P18111 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm17131-201ENSMUST00000164420 3846 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm43613-201ENSMUST00000199409 1613 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 AC126439.1-201ENSMUST00000226772 2104 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Cdx1P18111 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Cdx1P18111 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Cdx1P18111 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Cdx1P18111 Gm25537-201ENSMUST00000103851 109 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Gm24608-201ENSMUST00000104381 136 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Cdx1P18111 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Cdx1P18111 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC3.87□□□□□ -1.79
Cdx1P18111 Gm15670-201ENSMUST00000117740 447 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Gm12287-201ENSMUST00000119770 707 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Gm11278-201ENSMUST00000121002 997 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Gm14784-201ENSMUST00000121604 663 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC3.87□□□□□ -1.79
Cdx1P18111 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC3.87□□□□□ -1.79
Cdx1P18111 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.87□□□□□ -1.79
Cdx1P18111 Gm26310-201ENSMUST00000157766 117 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Gm22968-201ENSMUST00000157955 118 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Gm25348-201ENSMUST00000158961 111 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Gm3053-201ENSMUST00000161709 616 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Gm20526-201ENSMUST00000173416 158 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Cdx1P18111 Gm19002-201ENSMUST00000192649 1012 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Gm21006-201ENSMUST00000196930 667 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Gm42542-201ENSMUST00000197978 268 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Cdx1P18111 Gm43124-201ENSMUST00000201878 278 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC3.87□□□□□ -1.79
Cdx1P18111 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Cdx1P18111 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.87□□□□□ -1.79
Cdx1P18111 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.87□□□□□ -1.79
Cdx1P18111 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Cdx1P18111 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Gm39197-201ENSMUST00000212069 457 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Cdx1P18111 Gm6362-201ENSMUST00000217686 836 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 AC153553.1-201ENSMUST00000218257 684 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 AC134439.1-201ENSMUST00000220923 600 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Gm40598-201ENSMUST00000222953 547 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 AC154626.1-201ENSMUST00000226070 311 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 AC154657.1-201ENSMUST00000226394 775 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 AC163646.1-201ENSMUST00000227704 397 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Cdx1P18111 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Cdx1P18111 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Cdx1P18111 Gm25821-201ENSMUST00000093657 133 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Cdx1P18111 Olfr654-201ENSMUST00000098173 1155 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Cdx1P18111 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Cdx1P18111 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Cdx1P18111 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.87□□□□□ -1.79
Cdx1P18111 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Cdx1P18111 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Cdx1P18111 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Cdx1P18111 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Cdx1P18111 Gm14163-201ENSMUST00000117342 217 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm12230-201ENSMUST00000118301 454 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm15754-201ENSMUST00000119191 478 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm14927-201ENSMUST00000120283 454 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm11404-201ENSMUST00000120872 494 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm13868-201ENSMUST00000122411 294 ntBASIC3.86□□□□□ -1.79
Cdx1P18111 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC3.86□□□□□ -1.79
Cdx1P18111 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC3.86□□□□□ -1.79
Cdx1P18111 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Cdx1P18111 Gm4487-201ENSMUST00000150617 442 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms