Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RaraP11416 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RaraP11416 Gm37311-201ENSMUST00000195541 2024 ntBASIC6.32□□□□□ -1.4
RaraP11416 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RaraP11416 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RaraP11416 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.31□□□□□ -1.4
RaraP11416 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RaraP11416 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.31□□□□□ -1.4
RaraP11416 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RaraP11416 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RaraP11416 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm22499-201ENSMUST00000104501 135 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm24275-201ENSMUST00000116780 146 ntBASIC6.31□□□□□ -1.4
RaraP11416 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm12451-201ENSMUST00000121636 633 ntBASIC6.31□□□□□ -1.4
RaraP11416 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm25781-201ENSMUST00000122527 84 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC6.31□□□□□ -1.4
RaraP11416 Gm24534-201ENSMUST00000157949 291 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm23068-201ENSMUST00000158239 293 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm22519-201ENSMUST00000158270 178 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RaraP11416 Gm9597-201ENSMUST00000171913 602 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm25065-201ENSMUST00000177914 132 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm25891-201ENSMUST00000180050 132 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm27006-201ENSMUST00000182218 943 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm29556-201ENSMUST00000187591 696 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm18444-201ENSMUST00000191239 629 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm43233-201ENSMUST00000200491 616 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm6719-201ENSMUST00000202067 335 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm43976-201ENSMUST00000203637 235 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm44472-201ENSMUST00000204922 943 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm44687-201ENSMUST00000204975 235 ntBASIC6.31□□□□□ -1.4
RaraP11416 Gm44927-201ENSMUST00000207573 716 ntBASIC6.31□□□□□ -1.4
RaraP11416 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.31□□□□□ -1.4
RaraP11416 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.31□□□□□ -1.4
RaraP11416 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.31□□□□□ -1.4
RaraP11416 AC154506.1-201ENSMUST00000225178 621 ntBASIC6.31□□□□□ -1.4
RaraP11416 CT030182.3-201ENSMUST00000225986 582 ntBASIC6.31□□□□□ -1.4
RaraP11416 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC6.31□□□□□ -1.4
RaraP11416 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RaraP11416 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RaraP11416 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RaraP11416 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.31□□□□□ -1.4
RaraP11416 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RaraP11416 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.31□□□□□ -1.4
RaraP11416 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RaraP11416 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
RaraP11416 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.31□□□□□ -1.4
RaraP11416 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
RaraP11416 Gm38243-201ENSMUST00000194737 1567 ntBASIC6.31□□□□□ -1.4
RaraP11416 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.31□□□□□ -1.4
RaraP11416 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.31□□□□□ -1.4
RaraP11416 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.31□□□□□ -1.4
RaraP11416 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.3□□□□□ -1.4
RaraP11416 AC162910.1-201ENSMUST00000221219 1723 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RaraP11416 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
RaraP11416 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RaraP11416 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.3□□□□□ -1.4
RaraP11416 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RaraP11416 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RaraP11416 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RaraP11416 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RaraP11416 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RaraP11416 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RaraP11416 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
RaraP11416 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.3□□□□□ -1.4
RaraP11416 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
RaraP11416 Gm23431-201ENSMUST00000104006 107 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm14385-201ENSMUST00000116315 876 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm8475-201ENSMUST00000118211 526 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm14897-201ENSMUST00000118213 207 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm14001-201ENSMUST00000118847 247 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm13503-201ENSMUST00000119017 446 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm11890-201ENSMUST00000119585 417 ntBASIC6.3□□□□□ -1.4
RaraP11416 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm9225-201ENSMUST00000121921 836 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm25808-201ENSMUST00000122784 284 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RaraP11416 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RaraP11416 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC6.3□□□□□ -1.4
RaraP11416 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC6.3□□□□□ -1.4
RaraP11416 Gm20794-201ENSMUST00000177626 628 ntBASIC6.3□□□□□ -1.4
RaraP11416 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm23977-201ENSMUST00000177871 74 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
RaraP11416 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RaraP11416 Gm21070-201ENSMUST00000182425 985 ntBASIC6.3□□□□□ -1.4
RaraP11416 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC6.3□□□□□ -1.4
RaraP11416 Scgb2b6-201ENSMUST00000188132 330 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC6.3□□□□□ -1.4
RaraP11416 Ighv3-7-201ENSMUST00000193370 348 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm5694-201ENSMUST00000195648 641 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm2053-201ENSMUST00000195671 631 ntBASIC6.3□□□□□ -1.4
RaraP11416 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RaraP11416 Gm44316-201ENSMUST00000199274 97 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm44162-201ENSMUST00000203543 544 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms