Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Col1a1P11087 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Col1a1P11087 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.02□□□□□ -1.61
Col1a1P11087 Gm18429-201ENSMUST00000198707 421 ntBASIC5.02□□□□□ -1.61
Col1a1P11087 Gm43005-201ENSMUST00000199015 648 ntBASIC5.02□□□□□ -1.61
Col1a1P11087 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC5.02□□□□□ -1.61
Col1a1P11087 Gm44261-201ENSMUST00000203337 209 ntBASIC5.02□□□□□ -1.61
Col1a1P11087 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Col1a1P11087 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.02□□□□□ -1.61
Col1a1P11087 Vmn1r89-206ENSMUST00000227319 985 ntBASIC5.02□□□□□ -1.61
Col1a1P11087 Gm7099-201ENSMUST00000080066 554 ntBASIC5.02□□□□□ -1.61
Col1a1P11087 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col1a1P11087 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col1a1P11087 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.02□□□□□ -1.61
Col1a1P11087 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Col1a1P11087 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col1a1P11087 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.02□□□□□ -1.61
Col1a1P11087 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.02□□□□□ -1.61
Col1a1P11087 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.02□□□□□ -1.61
Col1a1P11087 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col1a1P11087 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col1a1P11087 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Col1a1P11087 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col1a1P11087 Gm23226-201ENSMUST00000116927 103 ntBASIC5.01□□□□□ -1.61
Col1a1P11087 Gm15313-201ENSMUST00000119179 282 ntBASIC5.01□□□□□ -1.61
Col1a1P11087 Gm7219-201ENSMUST00000119619 297 ntBASIC5.01□□□□□ -1.61
Col1a1P11087 Gm11398-201ENSMUST00000120330 320 ntBASIC5.01□□□□□ -1.61
Col1a1P11087 Gm11829-201ENSMUST00000121003 282 ntBASIC5.01□□□□□ -1.61
Col1a1P11087 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.01□□□□□ -1.61
Col1a1P11087 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col1a1P11087 Gm29408-201ENSMUST00000187536 216 ntBASIC5.01□□□□□ -1.61
Col1a1P11087 Gm37241-201ENSMUST00000191736 523 ntBASIC5.01□□□□□ -1.61
Col1a1P11087 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col1a1P11087 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC5.01□□□□□ -1.61
Col1a1P11087 Gm2314-201ENSMUST00000200391 586 ntBASIC5.01□□□□□ -1.61
Col1a1P11087 Gm42453-201ENSMUST00000200477 409 ntBASIC5.01□□□□□ -1.61
Col1a1P11087 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC5.01□□□□□ -1.61
Col1a1P11087 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Col1a1P11087 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Col1a1P11087 Gm34779-201ENSMUST00000210036 263 ntBASIC5.01□□□□□ -1.61
Col1a1P11087 AC122305.2-201ENSMUST00000215148 834 ntBASIC5.01□□□□□ -1.61
Col1a1P11087 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.01□□□□□ -1.61
Col1a1P11087 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC5.01□□□□□ -1.61
Col1a1P11087 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col1a1P11087 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Col1a1P11087 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Col1a1P11087 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.01□□□□□ -1.61
Col1a1P11087 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col1a1P11087 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.01□□□□□ -1.61
Col1a1P11087 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col1a1P11087 Gm19176-201ENSMUST00000222149 1831 ntBASIC5.01□□□□□ -1.61
Col1a1P11087 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col1a1P11087 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col1a1P11087 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col1a1P11087 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Col1a1P11087 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC5.01□□□□□ -1.61
Col1a1P11087 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Col1a1P11087 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Col1a1P11087 Gm23746-201ENSMUST00000104229 125 ntBASIC5□□□□□ -1.61
Col1a1P11087 Gm26019-201ENSMUST00000104407 119 ntBASIC5□□□□□ -1.61
Col1a1P11087 Gm3160-201ENSMUST00000128343 607 ntBASIC5□□□□□ -1.61
Col1a1P11087 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC5□□□□□ -1.61
Col1a1P11087 Gm24636-201ENSMUST00000158673 288 ntBASIC5□□□□□ -1.61
Col1a1P11087 Gm22135-201ENSMUST00000158752 108 ntBASIC5□□□□□ -1.61
Col1a1P11087 Gm37164-201ENSMUST00000192809 637 ntBASIC5□□□□□ -1.61
Col1a1P11087 Gm42566-201ENSMUST00000197120 643 ntBASIC5□□□□□ -1.61
Col1a1P11087 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC5□□□□□ -1.61
Col1a1P11087 Gm18487-201ENSMUST00000215826 878 ntBASIC5□□□□□ -1.61
Col1a1P11087 AC122188.1-201ENSMUST00000217534 312 ntBASIC5□□□□□ -1.61
Col1a1P11087 AC117949.2-201ENSMUST00000225900 584 ntBASIC5□□□□□ -1.61
Col1a1P11087 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Col1a1P11087 Gm23443-201ENSMUST00000082916 128 ntBASIC5□□□□□ -1.61
Col1a1P11087 n-R5s54-201ENSMUST00000083837 112 ntBASIC5□□□□□ -1.61
Col1a1P11087 n-R5s151-201ENSMUST00000083959 119 ntBASIC5□□□□□ -1.61
Col1a1P11087 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col1a1P11087 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col1a1P11087 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Col1a1P11087 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Col1a1P11087 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col1a1P11087 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Col1a1P11087 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col1a1P11087 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col1a1P11087 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Col1a1P11087 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col1a1P11087 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5□□□□□ -1.61
Col1a1P11087 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Col1a1P11087 Mir105-201ENSMUST00000104655 80 ntBASIC5□□□□□ -1.61
Col1a1P11087 Gm11781-201ENSMUST00000118328 472 ntBASIC5□□□□□ -1.61
Col1a1P11087 Defa-ps5-201ENSMUST00000121541 279 ntBASIC5□□□□□ -1.61
Col1a1P11087 Gm26148-201ENSMUST00000157430 68 ntBASIC5□□□□□ -1.61
Col1a1P11087 Gm22156-201ENSMUST00000158409 141 ntBASIC5□□□□□ -1.61
Col1a1P11087 Gm5258-201ENSMUST00000165437 327 ntBASIC5□□□□□ -1.61
Col1a1P11087 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Col1a1P11087 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5□□□□□ -1.61
Col1a1P11087 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC5□□□□□ -1.61
Col1a1P11087 Gm37416-201ENSMUST00000193596 318 ntBASIC5□□□□□ -1.61
Col1a1P11087 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC5□□□□□ -1.61
Col1a1P11087 Gm36259-201ENSMUST00000197340 392 ntBASIC5□□□□□ -1.61
Col1a1P11087 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC5□□□□□ -1.61
Col1a1P11087 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms