Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm11970-201ENSMUST00000116105 320 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm14575-201ENSMUST00000117210 560 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm15332-201ENSMUST00000118386 357 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm14678-201ENSMUST00000121396 482 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm13363-201ENSMUST00000122008 522 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm25660-201ENSMUST00000158470 104 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm25163-201ENSMUST00000158905 104 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm19932-201ENSMUST00000177033 313 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm22776-201ENSMUST00000178634 94 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm23767-201ENSMUST00000179278 94 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm4832-201ENSMUST00000182679 399 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm27998-201ENSMUST00000184902 361 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm38019-201ENSMUST00000195133 380 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm31211-201ENSMUST00000199170 253 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm44163-201ENSMUST00000205140 475 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm8523-201ENSMUST00000211386 552 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm18487-201ENSMUST00000215826 878 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm22364-201ENSMUST00000083097 98 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 AW046200-203ENSMUST00000211787 2479 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm12717-201ENSMUST00000118427 983 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm14580-201ENSMUST00000119122 718 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm12891-201ENSMUST00000119358 240 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm15152-201ENSMUST00000121540 394 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm11438-201ENSMUST00000121582 189 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm24477-201ENSMUST00000157438 103 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm23852-201ENSMUST00000158376 77 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm22428-201ENSMUST00000158554 132 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm21999-201ENSMUST00000165985 387 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm17044-201ENSMUST00000168549 828 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Mir5128-201ENSMUST00000175217 84 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm29284-201ENSMUST00000188363 255 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm5734-201ENSMUST00000189787 913 ntBASIC5.19□□□□□ -1.58
Pcdh1F7BJK1 Gm8823-201ENSMUST00000193158 433 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms