Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm6893-201ENSMUST00000118385 522 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm11790-201ENSMUST00000119569 455 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm13170-201ENSMUST00000119716 643 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm25843-201ENSMUST00000122582 314 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.13□□□□□ -1.75
CtcflA2APF3 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm25447-201ENSMUST00000158997 128 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC4.13□□□□□ -1.75
CtcflA2APF3 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm2497-201ENSMUST00000189539 601 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm28957-201ENSMUST00000190174 373 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm28267-201ENSMUST00000191093 265 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CtcflA2APF3 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm44330-201ENSMUST00000200106 143 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm44003-201ENSMUST00000203024 490 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CtcflA2APF3 Gm45710-201ENSMUST00000212847 215 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CtcflA2APF3 Mir28a-201ENSMUST00000083560 86 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 Mir202-201ENSMUST00000083568 72 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.13□□□□□ -1.75
CtcflA2APF3 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CtcflA2APF3 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CtcflA2APF3 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CtcflA2APF3 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CtcflA2APF3 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CtcflA2APF3 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CtcflA2APF3 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CtcflA2APF3 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm12808-201ENSMUST00000120597 404 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm12978-201ENSMUST00000121250 522 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm16345-201ENSMUST00000146065 158 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.12□□□□□ -1.75
CtcflA2APF3 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC4.12□□□□□ -1.75
CtcflA2APF3 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC4.12□□□□□ -1.75
CtcflA2APF3 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm43028-201ENSMUST00000202561 481 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm44389-201ENSMUST00000203795 182 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm2522-201ENSMUST00000204280 322 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm19908-201ENSMUST00000204684 391 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CtcflA2APF3 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CtcflA2APF3 AC142113.2-201ENSMUST00000217425 748 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm19181-201ENSMUST00000218891 940 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 AC131745.2-201ENSMUST00000225736 565 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm22868-201ENSMUST00000083955 164 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CtcflA2APF3 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CtcflA2APF3 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CtcflA2APF3 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CtcflA2APF3 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CtcflA2APF3 Synpr-207ENSMUST00000223583 3362 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.12□□□□□ -1.75
CtcflA2APF3 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CtcflA2APF3 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CtcflA2APF3 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CtcflA2APF3 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC4.11□□□□□ -1.75
CtcflA2APF3 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CtcflA2APF3 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CtcflA2APF3 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
CtcflA2APF3 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm14854-201ENSMUST00000117758 841 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm12423-201ENSMUST00000118334 135 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm13314-201ENSMUST00000118742 335 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm22885-201ENSMUST00000157410 107 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm15838-201ENSMUST00000161575 180 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm17177-201ENSMUST00000169144 483 ntBASIC4.11□□□□□ -1.75
CtcflA2APF3 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.11□□□□□ -1.75
CtcflA2APF3 Gm22254-201ENSMUST00000179186 110 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms