Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 AC168062.2-201ENSMUST00000228907 422 ntBASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
Ddx56Q9D0R4 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm24962-201ENSMUST00000157917 109 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm24186-201ENSMUST00000157983 127 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm23317-201ENSMUST00000157999 129 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Mir6393-201ENSMUST00000183709 94 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Mir6539-201ENSMUST00000183732 110 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm3496-201ENSMUST00000188283 745 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm36939-201ENSMUST00000194889 439 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm43825-201ENSMUST00000199650 734 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm8719-201ENSMUST00000203602 534 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm7688-201ENSMUST00000212857 337 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 AC120540.1-201ENSMUST00000221879 324 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm19195-201ENSMUST00000222018 511 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm2544-201ENSMUST00000222702 756 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm9202-201ENSMUST00000223036 437 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm23508-201ENSMUST00000083079 72 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Mir331-201ENSMUST00000083673 96 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm7133-201ENSMUST00000187797 2039 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.6□□□□□ -1.51
Ddx56Q9D0R4 Smc5-206ENSMUST00000226111 3265 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm38278-201ENSMUST00000194715 1365 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm22266-201ENSMUST00000104011 138 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm12768-201ENSMUST00000120055 759 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms