Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm25019-201ENSMUST00000179732 110 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Mir6337-201ENSMUST00000184194 105 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm27679-201ENSMUST00000184612 84 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm29596-201ENSMUST00000185710 385 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm18444-201ENSMUST00000191239 629 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm38234-201ENSMUST00000195204 421 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm5284-201ENSMUST00000199053 903 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm44316-201ENSMUST00000199274 97 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm44048-201ENSMUST00000204531 361 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm7039-201ENSMUST00000205138 346 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm45405-201ENSMUST00000211544 609 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm18850-201ENSMUST00000211578 388 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 AC160931.2-201ENSMUST00000221445 351 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Gm5229-201ENSMUST00000039375 354 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 n-R5s37-201ENSMUST00000082533 118 ntBASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nkx6-1Q99MA9 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm37531-201ENSMUST00000191628 5415 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Mir678-201ENSMUST00000102114 84 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm25758-201ENSMUST00000103987 129 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm13785-201ENSMUST00000119099 690 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm15786-201ENSMUST00000121079 450 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm24635-201ENSMUST00000122712 128 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm24901-201ENSMUST00000158125 110 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm24767-201ENSMUST00000158509 95 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm16101-201ENSMUST00000160695 430 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm5709-201ENSMUST00000177879 1165 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm5430-201ENSMUST00000182525 915 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm28700-201ENSMUST00000187614 579 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm10193-201ENSMUST00000188288 231 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm28404-201ENSMUST00000190242 453 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm18036-201ENSMUST00000195256 272 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm44923-201ENSMUST00000206673 85 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm20304-201ENSMUST00000218168 444 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 Gm40692-201ENSMUST00000220411 491 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.6□□□□□ -1.51
Nkx6-1Q99MA9 AC102575.1-201ENSMUST00000225348 547 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms