Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm37393-201ENSMUST00000195118 3870 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm14046-201ENSMUST00000119389 509 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm13213-201ENSMUST00000119668 474 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm11575-201ENSMUST00000122243 228 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm24417-201ENSMUST00000178123 79 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm24653-201ENSMUST00000178541 79 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm25934-201ENSMUST00000178642 79 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm4859-201ENSMUST00000199625 787 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm29785-201ENSMUST00000217033 383 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm46436-201ENSMUST00000221851 1294 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm23407-201ENSMUST00000082538 91 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm25260-201ENSMUST00000083053 134 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Gm13712-201ENSMUST00000117484 2295 ntBASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
Vps53Q8CCB4 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm45324-201ENSMUST00000211193 5638 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm11486-201ENSMUST00000107322 478 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm12245-201ENSMUST00000117266 357 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm15185-201ENSMUST00000117397 746 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm7657-201ENSMUST00000118851 666 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm14589-201ENSMUST00000121640 727 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm9687-201ENSMUST00000189312 602 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm10048-201ENSMUST00000194196 372 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm42720-201ENSMUST00000196813 300 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm44282-201ENSMUST00000203199 190 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm44023-201ENSMUST00000203710 469 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm9373-201ENSMUST00000208724 599 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm45379-201ENSMUST00000211772 549 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm18924-201ENSMUST00000211929 316 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm46369-201ENSMUST00000221577 401 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 AC140210.1-201ENSMUST00000224961 534 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 AC164116.2-201ENSMUST00000225398 1038 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 AC164597.2-201ENSMUST00000226738 603 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 AC154838.1-201ENSMUST00000228944 911 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm24763-201ENSMUST00000083688 190 ntBASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Vps53Q8CCB4 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Vps53Q8CCB4 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Vps53Q8CCB4 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.8□□□□□ -1.48
Vps53Q8CCB4 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Vps53Q8CCB4 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Vps53Q8CCB4 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Vps53Q8CCB4 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Vps53Q8CCB4 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.8□□□□□ -1.48
Vps53Q8CCB4 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Vps53Q8CCB4 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Vps53Q8CCB4 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC5.8□□□□□ -1.48
Vps53Q8CCB4 Gm3835-201ENSMUST00000120752 403 ntBASIC5.8□□□□□ -1.48
Vps53Q8CCB4 Gm15388-201ENSMUST00000121578 726 ntBASIC5.8□□□□□ -1.48
Vps53Q8CCB4 Gm23837-201ENSMUST00000122656 286 ntBASIC5.8□□□□□ -1.48
Vps53Q8CCB4 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms