Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm15313-201ENSMUST00000119179 282 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm14473-201ENSMUST00000122269 557 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm25846-201ENSMUST00000158013 135 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm27033-201ENSMUST00000183226 544 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm29408-201ENSMUST00000187536 216 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm29704-201ENSMUST00000196011 253 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm6177-201ENSMUST00000085589 465 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Col6a6Q8C6K9 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.8
Col6a6Q8C6K9 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.84□□□□□ -1.8
Col6a6Q8C6K9 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Col6a6Q8C6K9 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
Col6a6Q8C6K9 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Col6a6Q8C6K9 Gm6558-201ENSMUST00000191934 1973 ntBASIC3.84□□□□□ -1.8
Col6a6Q8C6K9 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm42986-201ENSMUST00000201618 3385 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm23271-201ENSMUST00000104052 124 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm23133-201ENSMUST00000104255 135 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm15014-201ENSMUST00000120742 258 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm37173-201ENSMUST00000194498 1017 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm19243-201ENSMUST00000198592 269 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm42983-201ENSMUST00000199879 815 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm44261-201ENSMUST00000203337 209 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm44032-201ENSMUST00000204841 166 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm7368-201ENSMUST00000213307 367 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Olfr936-202ENSMUST00000216912 937 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm3086-202ENSMUST00000221248 310 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm43188-201ENSMUST00000200180 2160 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm43025-201ENSMUST00000201764 1886 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm38284-201ENSMUST00000194803 4539 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm7219-201ENSMUST00000119619 297 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm11742-201ENSMUST00000119903 233 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm25177-201ENSMUST00000122634 117 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm10357-201ENSMUST00000159886 264 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm23860-201ENSMUST00000179446 132 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm6057-201ENSMUST00000195927 314 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm18429-201ENSMUST00000198707 421 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm44321-201ENSMUST00000204262 2855 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm45160-201ENSMUST00000207112 3099 ntBASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Col6a6Q8C6K9 Gm43200-201ENSMUST00000200385 2161 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm14575-201ENSMUST00000117210 560 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm15916-201ENSMUST00000118355 736 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm15988-201ENSMUST00000118677 367 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm15034-201ENSMUST00000120043 349 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm23496-201ENSMUST00000157741 248 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm24520-201ENSMUST00000179510 110 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm5244-202ENSMUST00000189517 743 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm18116-201ENSMUST00000220920 537 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm42842-201ENSMUST00000197736 3004 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms