Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm29586-207ENSMUST00000189745 615 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Trim35Q8C006 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm2623-201ENSMUST00000199229 286 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Igkv4-77-201ENSMUST00000199410 352 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm43600-201ENSMUST00000202134 223 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm44743-201ENSMUST00000209062 386 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 AC163623.2-202ENSMUST00000214165 610 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trim35Q8C006 CT025616.1-201ENSMUST00000221158 412 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 AC239878.1-201ENSMUST00000224212 506 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 AC160984.2-201ENSMUST00000224927 791 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 AC115735.2-201ENSMUST00000227135 351 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm24143-201ENSMUST00000082633 145 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm23645-201ENSMUST00000083228 108 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm23460-201ENSMUST00000083258 109 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Mir24-2-201ENSMUST00000083607 107 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm24521-201ENSMUST00000083958 107 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trim35Q8C006 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Trim35Q8C006 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm45407-201ENSMUST00000209499 3676 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Gm21940-201ENSMUST00000204940 2278 ntBASIC7.77□□□□□ -1.17
Trim35Q8C006 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7.77□□□□□ -1.17
Trim35Q8C006 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC7.77□□□□□ -1.17
Trim35Q8C006 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim35Q8C006 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm9894-201ENSMUST00000171257 2904 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim35Q8C006 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim35Q8C006 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim35Q8C006 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim35Q8C006 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim35Q8C006 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim35Q8C006 CT010514.1-201ENSMUST00000214088 2969 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim35Q8C006 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim35Q8C006 Fam35a-206ENSMUST00000228626 3100 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm24334-201ENSMUST00000104210 128 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm13750-201ENSMUST00000117621 465 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm8688-201ENSMUST00000118240 969 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Fau-ps2-201ENSMUST00000119333 371 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm14748-201ENSMUST00000119819 411 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm11954-201ENSMUST00000121403 349 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm25985-201ENSMUST00000122677 107 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm23557-201ENSMUST00000157820 138 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm24050-201ENSMUST00000158623 290 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim35Q8C006 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Trim35Q8C006 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim35Q8C006 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim35Q8C006 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm43206-201ENSMUST00000197990 114 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm5110-201ENSMUST00000203122 1063 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm8921-201ENSMUST00000204306 649 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim35Q8C006 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm18468-201ENSMUST00000207321 369 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm18465-201ENSMUST00000207468 369 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm18458-201ENSMUST00000207908 369 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm33096-201ENSMUST00000210189 493 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm45860-201ENSMUST00000212700 334 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 AC154307.1-201ENSMUST00000214799 90 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 AC133650.1-201ENSMUST00000217243 578 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim35Q8C006 AC140208.1-201ENSMUST00000226609 285 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim35Q8C006 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm43888-201ENSMUST00000204405 2587 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim35Q8C006 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim35Q8C006 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim35Q8C006 Gm38065-201ENSMUST00000193147 3492 ntBASIC7.76□□□□□ -1.17
Trim35Q8C006 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7.76□□□□□ -1.17
Trim35Q8C006 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim35Q8C006 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Trim35Q8C006 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.75□□□□□ -1.17
Trim35Q8C006 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim35Q8C006 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Trim35Q8C006 Olfr324-202ENSMUST00000214990 3624 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms