Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm6893-201ENSMUST00000118385 522 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm14125-202ENSMUST00000120921 756 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm15974-201ENSMUST00000159103 531 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Magea9-ps-202ENSMUST00000167328 899 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm21894-201ENSMUST00000179631 546 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm37845-201ENSMUST00000194977 355 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm19253-201ENSMUST00000204279 307 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm5339-201ENSMUST00000210551 1102 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm18924-201ENSMUST00000211929 316 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 AC111046.1-201ENSMUST00000217715 412 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm46234-201ENSMUST00000218702 259 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm2645-201ENSMUST00000223516 547 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 AC124524.2-201ENSMUST00000223940 588 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 AC154727.1-201ENSMUST00000226537 499 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 AC154484.1-201ENSMUST00000227311 771 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm24254-201ENSMUST00000083702 104 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.04□□□□□ -1.6
Ubfd1Q78JW9 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm37936-201ENSMUST00000194647 1322 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm26300-201ENSMUST00000102282 94 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm22468-201ENSMUST00000116680 120 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm26248-201ENSMUST00000116700 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm26137-201ENSMUST00000116701 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm26190-201ENSMUST00000116704 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm24617-201ENSMUST00000116705 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm25778-201ENSMUST00000116713 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm25774-201ENSMUST00000116717 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm22102-201ENSMUST00000116730 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm23177-201ENSMUST00000116784 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm24193-201ENSMUST00000116801 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm24744-201ENSMUST00000116833 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm24427-201ENSMUST00000116896 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm22346-201ENSMUST00000116918 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm23606-201ENSMUST00000116938 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm22029-201ENSMUST00000116940 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm26298-201ENSMUST00000116956 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm23844-201ENSMUST00000116959 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm24484-201ENSMUST00000117009 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm25347-201ENSMUST00000117026 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm22112-201ENSMUST00000117032 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm14050-201ENSMUST00000117052 346 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm7485-201ENSMUST00000119502 1109 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm25979-201ENSMUST00000157177 138 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm23700-201ENSMUST00000158842 102 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm22991-201ENSMUST00000178126 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm25754-201ENSMUST00000178653 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm22419-201ENSMUST00000178780 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm24802-201ENSMUST00000178897 121 ntBASIC5.03□□□□□ -1.6
Ubfd1Q78JW9 Gm25208-201ENSMUST00000178964 121 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms