Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Mir669o-201ENSMUST00000103898 96 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm23906-201ENSMUST00000157573 128 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm24198-201ENSMUST00000157812 108 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm19898-201ENSMUST00000177490 251 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm21894-201ENSMUST00000179631 546 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm27688-201ENSMUST00000183634 91 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm27286-201ENSMUST00000184934 179 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Mir6933-201ENSMUST00000184982 81 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm45209-201ENSMUST00000207122 353 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm34005-201ENSMUST00000215834 282 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm5750-201ENSMUST00000218711 801 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm23628-201ENSMUST00000082464 173 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 n-R5s196-201ENSMUST00000083136 117 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm20679-201ENSMUST00000177285 1402 ntBASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ddx55Q6ZPL9 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Gm23193-201ENSMUST00000102427 82 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Gm13733-201ENSMUST00000117290 535 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Gm12230-201ENSMUST00000118301 454 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Zfp389-201ENSMUST00000118425 675 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Gm18953-201ENSMUST00000175694 300 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Gm37670-201ENSMUST00000193622 229 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Gm18340-201ENSMUST00000196342 609 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Gm43350-201ENSMUST00000196382 711 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 AC156504.1-201ENSMUST00000214608 157 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 AC160114.1-201ENSMUST00000221930 365 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 AC121114.1-201ENSMUST00000228522 570 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Gm24144-201ENSMUST00000082632 111 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 AC169038.1-201ENSMUST00000227378 1352 ntBASIC5.8□□□□□ -1.48
Ddx55Q6ZPL9 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms