Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Usp49Q6P9L4 Gm44259-201ENSMUST00000204996 298 ntBASIC5.4□□□□□ -1.54
Usp49Q6P9L4 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC5.4□□□□□ -1.54
Usp49Q6P9L4 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.4□□□□□ -1.54
Usp49Q6P9L4 AC154510.1-201ENSMUST00000223925 737 ntBASIC5.4□□□□□ -1.54
Usp49Q6P9L4 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.4□□□□□ -1.54
Usp49Q6P9L4 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.4□□□□□ -1.54
Usp49Q6P9L4 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.4□□□□□ -1.54
Usp49Q6P9L4 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Usp49Q6P9L4 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Usp49Q6P9L4 Gm23927-201ENSMUST00000082466 215 ntBASIC5.4□□□□□ -1.54
Usp49Q6P9L4 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.4□□□□□ -1.54
Usp49Q6P9L4 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Usp49Q6P9L4 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Usp49Q6P9L4 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Usp49Q6P9L4 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.4□□□□□ -1.55
Usp49Q6P9L4 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Usp49Q6P9L4 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Usp49Q6P9L4 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
Usp49Q6P9L4 Gm3089-201ENSMUST00000200804 1395 ntBASIC5.4□□□□□ -1.55
Usp49Q6P9L4 Gm3302-201ENSMUST00000201462 1395 ntBASIC5.4□□□□□ -1.55
Usp49Q6P9L4 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Usp49Q6P9L4 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.4□□□□□ -1.55
Usp49Q6P9L4 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC5.4□□□□□ -1.55
Usp49Q6P9L4 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm23879-201ENSMUST00000116874 126 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm3267-201ENSMUST00000118671 473 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm11200-201ENSMUST00000121698 448 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm25179-201ENSMUST00000122632 128 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm16254-201ENSMUST00000131528 730 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm38333-201ENSMUST00000193608 604 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm7299-201ENSMUST00000194441 581 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm9245-201ENSMUST00000200528 983 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm44648-201ENSMUST00000208267 329 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 AC140368.1-202ENSMUST00000226131 658 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm23626-201ENSMUST00000082458 133 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm6177-201ENSMUST00000085589 465 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC5.39□□□□□ -1.55
Usp49Q6P9L4 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.38□□□□□ -1.55
Usp49Q6P9L4 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Usp49Q6P9L4 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Mir669p-2-201ENSMUST00000103868 87 ntBASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Mir669p-1-201ENSMUST00000103884 87 ntBASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Gm23964-201ENSMUST00000157966 107 ntBASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Gm23069-201ENSMUST00000158240 311 ntBASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Gm25413-201ENSMUST00000158544 312 ntBASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Gm18397-201ENSMUST00000176704 587 ntBASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Gm37987-201ENSMUST00000194999 825 ntBASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Gm18748-201ENSMUST00000198507 622 ntBASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Gm44485-201ENSMUST00000199569 137 ntBASIC5.38□□□□□ -1.55
Usp49Q6P9L4 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms