Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 CT030705.1-201ENSMUST00000223971 533 ntBASIC10.72□□□□□ -0.69
Trim41Q5NCC3 AV026068-231ENSMUST00000225862 482 ntBASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Mir30b-201ENSMUST00000083542 96 ntBASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trim41Q5NCC3 Gm43483-201ENSMUST00000196724 2860 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trim41Q5NCC3 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm16106-201ENSMUST00000119187 294 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm14115-201ENSMUST00000119242 482 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm14980-201ENSMUST00000121247 736 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm24584-201ENSMUST00000157972 107 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm8292-201ENSMUST00000162574 396 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm4134-201ENSMUST00000173244 563 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm22286-201ENSMUST00000179708 107 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm17781-201ENSMUST00000195232 649 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm44456-201ENSMUST00000196554 89 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm35876-201ENSMUST00000205044 459 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trim41Q5NCC3 AC153357.1-201ENSMUST00000219190 482 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm18628-201ENSMUST00000220584 475 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 AC211878.1-201ENSMUST00000221668 474 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 AC163664.2-201ENSMUST00000228894 459 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 AC126690.1-201ENSMUST00000228898 397 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trim41Q5NCC3 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm22749-201ENSMUST00000082490 107 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm24856-201ENSMUST00000082809 107 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm25258-201ENSMUST00000083049 107 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm24535-201ENSMUST00000083140 107 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Mir375-201ENSMUST00000083682 64 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Gm22352-201ENSMUST00000083917 107 ntBASIC10.71□□□□□ -0.69
Trim41Q5NCC3 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.7
Trim41Q5NCC3 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trim41Q5NCC3 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trim41Q5NCC3 Gm37216-201ENSMUST00000193817 3478 ntBASIC10.71□□□□□ -0.7
Trim41Q5NCC3 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trim41Q5NCC3 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm40020-201ENSMUST00000215677 1635 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm11885-201ENSMUST00000118473 1428 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm34294-201ENSMUST00000191912 4263 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm14901-201ENSMUST00000119001 283 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm14761-201ENSMUST00000121363 262 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm14970-201ENSMUST00000122289 355 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm22235-201ENSMUST00000157085 110 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm23501-201ENSMUST00000157744 256 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm25605-201ENSMUST00000158364 124 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm25655-201ENSMUST00000158465 290 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm22851-201ENSMUST00000178741 94 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm2719-201ENSMUST00000191929 444 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm37173-201ENSMUST00000194498 1017 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm43655-201ENSMUST00000197367 222 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm44382-201ENSMUST00000198683 122 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm45063-201ENSMUST00000203726 472 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm5457-201ENSMUST00000022260 333 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 n-R5s46-201ENSMUST00000083960 116 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm43169-201ENSMUST00000199544 4734 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trim41Q5NCC3 Gm38082-201ENSMUST00000192800 6882 ntBASIC10.7□□□□□ -0.7
Trim41Q5NCC3 AC159002.2-201ENSMUST00000228843 4874 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm38218-201ENSMUST00000193555 4689 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 Gm38137-201ENSMUST00000193735 1401 ntBASIC10.69□□□□□ -0.7
Trim41Q5NCC3 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trim41Q5NCC3 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 186.3 ms