Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm14806-201ENSMUST00000116606 2110 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm15394-201ENSMUST00000119656 1308 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 AC159188.2-201ENSMUST00000224103 1301 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm22758-201ENSMUST00000102275 96 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm5942-201ENSMUST00000120046 439 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm14784-201ENSMUST00000121604 663 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx3-1P97436 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm19807-201ENSMUST00000173971 667 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm27896-201ENSMUST00000175162 317 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm27940-201ENSMUST00000184449 98 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm28118-201ENSMUST00000185957 294 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm38150-201ENSMUST00000192996 452 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC3.88□□□□□ -1.79
Nkx3-1P97436 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm3189-201ENSMUST00000205595 832 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx3-1P97436 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm9616-201ENSMUST00000221154 781 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 AC159252.1-201ENSMUST00000224450 553 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 AC137950.3-201ENSMUST00000228250 246 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Nkx3-1P97436 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm45211-201ENSMUST00000206208 2650 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Nkx3-1P97436 Gm38125-201ENSMUST00000194136 3438 ntBASIC3.88□□□□□ -1.79
Nkx3-1P97436 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Nkx3-1P97436 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Nkx3-1P97436 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Nkx3-1P97436 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Nkx3-1P97436 Gm2123-201ENSMUST00000221476 2836 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Gm42986-201ENSMUST00000201618 3385 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Nkx3-1P97436 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Nkx3-1P97436 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC3.87□□□□□ -1.79
Nkx3-1P97436 Gm23743-201ENSMUST00000157389 274 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.87□□□□□ -1.79
Nkx3-1P97436 Gm44038-201ENSMUST00000203952 889 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Gm18320-201ENSMUST00000211304 595 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 AC110816.1-201ENSMUST00000218559 980 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Gm6171-201ENSMUST00000220760 645 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Gm3086-202ENSMUST00000221248 310 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 AC165106.3-201ENSMUST00000228191 3843 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 AC122035.2-201ENSMUST00000228698 462 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Nkx3-1P97436 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Nkx3-1P97436 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Nkx3-1P97436 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Nkx3-1P97436 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Mir383-201ENSMUST00000083523 70 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Gm6177-201ENSMUST00000085589 465 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Synpr-207ENSMUST00000223583 3362 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Nkx3-1P97436 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Nkx3-1P97436 AC162938.2-205ENSMUST00000217551 2828 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Gm2987-201ENSMUST00000187673 1693 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Nkx3-1P97436 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Nkx3-1P97436 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.87□□□□□ -1.79
Nkx3-1P97436 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Nkx3-1P97436 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Nkx3-1P97436 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.86□□□□□ -1.79
Nkx3-1P97436 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Nkx3-1P97436 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Nkx3-1P97436 Gm26367-201ENSMUST00000104165 132 ntBASIC3.86□□□□□ -1.79
Nkx3-1P97436 Gm13501-201ENSMUST00000118477 979 ntBASIC3.86□□□□□ -1.79
Nkx3-1P97436 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC3.86□□□□□ -1.79
Nkx3-1P97436 Gm14710-201ENSMUST00000146082 1066 ntBASIC3.86□□□□□ -1.79
Nkx3-1P97436 Gm24905-201ENSMUST00000158129 104 ntBASIC3.86□□□□□ -1.79
Nkx3-1P97436 Trbv10-201ENSMUST00000168322 289 ntBASIC3.86□□□□□ -1.79
Nkx3-1P97436 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Nkx3-1P97436 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC3.86□□□□□ -1.79
Nkx3-1P97436 Gm28304-201ENSMUST00000185977 312 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms