Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Sox3P53784 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Sox3P53784 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.42□□□□□ -1.7
Sox3P53784 Gm6171-201ENSMUST00000220760 645 ntBASIC4.42□□□□□ -1.7
Sox3P53784 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC4.42□□□□□ -1.7
Sox3P53784 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.42□□□□□ -1.7
Sox3P53784 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.42□□□□□ -1.7
Sox3P53784 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Sox3P53784 AC102603.1-201ENSMUST00000227481 584 ntBASIC4.42□□□□□ -1.7
Sox3P53784 AC124408.1-201ENSMUST00000228938 707 ntBASIC4.42□□□□□ -1.7
Sox3P53784 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sox3P53784 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Sox3P53784 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sox3P53784 Mir323-201ENSMUST00000083683 86 ntBASIC4.42□□□□□ -1.7
Sox3P53784 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sox3P53784 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sox3P53784 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Sox3P53784 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.42□□□□□ -1.7
Sox3P53784 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Sox3P53784 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Sox3P53784 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.42□□□□□ -1.7
Sox3P53784 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Sox3P53784 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Sox3P53784 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.42□□□□□ -1.7
Sox3P53784 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Sox3P53784 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sox3P53784 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.42□□□□□ -1.7
Sox3P53784 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Sox3P53784 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.42□□□□□ -1.7
Sox3P53784 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sox3P53784 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Sox3P53784 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Sox3P53784 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sox3P53784 Gm22473-201ENSMUST00000104114 132 ntBASIC4.41□□□□□ -1.7
Sox3P53784 Gm25420-201ENSMUST00000104216 127 ntBASIC4.41□□□□□ -1.7
Sox3P53784 Gm12423-201ENSMUST00000118334 135 ntBASIC4.41□□□□□ -1.7
Sox3P53784 Gm14067-201ENSMUST00000119340 314 ntBASIC4.41□□□□□ -1.7
Sox3P53784 Gm12852-201ENSMUST00000119478 719 ntBASIC4.41□□□□□ -1.7
Sox3P53784 Gm2182-201ENSMUST00000145243 663 ntBASIC4.41□□□□□ -1.7
Sox3P53784 Gm25432-201ENSMUST00000158284 66 ntBASIC4.41□□□□□ -1.7
Sox3P53784 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sox3P53784 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sox3P53784 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC4.41□□□□□ -1.7
Sox3P53784 Gm19807-201ENSMUST00000173971 667 ntBASIC4.41□□□□□ -1.7
Sox3P53784 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.41□□□□□ -1.7
Sox3P53784 Mir6344-201ENSMUST00000183462 104 ntBASIC4.41□□□□□ -1.7
Sox3P53784 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.41□□□□□ -1.7
Sox3P53784 Gm37682-201ENSMUST00000191776 522 ntBASIC4.41□□□□□ -1.7
Sox3P53784 Gm37857-201ENSMUST00000191784 1199 ntBASIC4.41□□□□□ -1.7
Sox3P53784 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.41□□□□□ -1.7
Sox3P53784 Gm18426-201ENSMUST00000191874 973 ntBASIC4.41□□□□□ -1.7
Sox3P53784 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.41□□□□□ -1.7
Sox3P53784 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC4.41□□□□□ -1.7
Sox3P53784 Gm5284-201ENSMUST00000199053 903 ntBASIC4.41□□□□□ -1.7
Sox3P53784 Gm44038-201ENSMUST00000203952 889 ntBASIC4.41□□□□□ -1.7
Sox3P53784 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.41□□□□□ -1.7
Sox3P53784 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC4.41□□□□□ -1.7
Sox3P53784 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
Sox3P53784 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
Sox3P53784 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sox3P53784 Gm6195-201ENSMUST00000063059 357 ntBASIC4.41□□□□□ -1.7
Sox3P53784 Gm24031-201ENSMUST00000083930 131 ntBASIC4.41□□□□□ -1.7
Sox3P53784 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
Sox3P53784 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sox3P53784 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sox3P53784 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Sox3P53784 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
Sox3P53784 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Sox3P53784 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Sox3P53784 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sox3P53784 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Sox3P53784 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Sox3P53784 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Sox3P53784 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Sox3P53784 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Sox3P53784 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
Sox3P53784 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.4□□□□□ -1.7
Sox3P53784 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Sox3P53784 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.4□□□□□ -1.7
Sox3P53784 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Sox3P53784 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Sox3P53784 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Sox3P53784 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Sox3P53784 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Sox3P53784 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sox3P53784 Gm26075-201ENSMUST00000104062 121 ntBASIC4.4□□□□□ -1.71
Sox3P53784 Gm24982-201ENSMUST00000104456 132 ntBASIC4.4□□□□□ -1.71
Sox3P53784 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC4.4□□□□□ -1.71
Sox3P53784 Gm11409-201ENSMUST00000118621 403 ntBASIC4.4□□□□□ -1.71
Sox3P53784 Gm15227-201ENSMUST00000121844 399 ntBASIC4.4□□□□□ -1.71
Sox3P53784 Gm15038-201ENSMUST00000122144 296 ntBASIC4.4□□□□□ -1.71
Sox3P53784 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.4□□□□□ -1.71
Sox3P53784 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sox3P53784 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.4□□□□□ -1.71
Sox3P53784 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sox3P53784 Gm26219-201ENSMUST00000175216 71 ntBASIC4.4□□□□□ -1.71
Sox3P53784 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC4.4□□□□□ -1.71
Sox3P53784 Gm27044-201ENSMUST00000183033 796 ntBASIC4.4□□□□□ -1.71
Sox3P53784 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sox3P53784 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms